@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VP83: (2017-11-20 )
MSTDPQFPTPNNLGIAVYSNNAETIGNTPLVRINRLIKTGATVLAKVESRNPAFSVKCRIGAALIADAEKRGVLKEGMHIVEPTSGNTGIALAFVAVAKGYSITLTMPASMSLERRKVLKALGANLVLTEPAKGMKGAVDEAVRLATEQPEIYFLPQQFENPANPQIHVDTTGPEIWQATGGQVDILVAGVGTGGTITGISRYFEQVQNKPLYSVAVEPAESPIITQTKNGENITPAPHKIQGIGANFIPKNLDLDLVDEVIPVSSEEAIQWARNCAAQEGILVGISSGAALAAAAKIAERPENAGKTIVVILPDSGERYLSSVLFEGLFDE

Atome Classification :

(58 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

MPD_A_3(2Q3B)
CYSK_MYCTU
[Raw transfer]



P1T_X_3(5DBH)
CYSK_HAEIN
[Raw transfer]



P1T_A_3(3PC3)
?
[Raw transfer]



OAS_X_3(4ZU6)
CYSK_HAEIN
[Raw transfer]



AWH_A_3(3ZEI)
CYSK_MYCTU
[Raw transfer]



CYS_A_2(4LMB)
?
[Raw transfer]



4AT_A_4(2EFY)
?
[Raw transfer]



4AT_B_6(2EFY)
?
[Raw transfer]



PLP_X_4(4ZU6)
CYSK_HAEIN
[Raw transfer]



PLP_E_5(1D6S)
CYSK_SALTY
[Raw transfer]



PLP_D_4(1D6S)
CYSK_SALTY
[Raw transfer]



PLP_E_5(1D6S)
CYSK_SALTY
[Raw transfer]



4MV_A_3(2ECO)
?
[Raw transfer]



FGA_B_11(4AIR)
?
[Raw transfer]



PLP_B_5(4L0D)
CBS_HUMAN
[Raw transfer]



PLP_B_10(3BM5)
?
[Raw transfer]



PLP_A_3(1OAS)
CYSK_SALTY
[Raw transfer]



PLP_A_3(4AEC)
CYSKM_ARATH
[Raw transfer]



PLP_D_16(1FCJ)
CYSK_SALTY
[Raw transfer]



PLP_A_13(1FCJ)
CYSK_SALTY
[Raw transfer]



PLP_A_3(4L0D)
CBS_HUMAN
[Raw transfer]



PLP_A_3(1OAS)
CYSK_SALTY
[Raw transfer]



PLP_B_15(1FCJ)
CYSK_SALTY
[Raw transfer]



PLP_B_4(1OAS)
CYSK_SALTY
[Raw transfer]



PLP_B_7(4LMA)
?
[Raw transfer]



PLP_B_18(4COO)
CBS_HUMAN
[Raw transfer]



PLP_A_5(4LMA)
?
[Raw transfer]



PLP_A_4(4LMB)
?
[Raw transfer]



PLP_A_3(1Z7W)
CYSK1_ARATH
[Raw transfer]



PLP_A_5(4LMA)
?
[Raw transfer]



PLP_A_3(1Z7W)
CYSK1_ARATH
[Raw transfer]



PLP_A_3(2EFY)
?
[Raw transfer]



PLP_B_5(4AEC)
CYSKM_ARATH
[Raw transfer]



PLP_A_3(1VE1)
?
[Raw transfer]



PLP_A_4(4LMB)
?
[Raw transfer]



PLP_A_5(2PQM)
?
[Raw transfer]



PLP_A_2(2ECQ)
?
[Raw transfer]



PLP_B_6(2PQM)
?
[Raw transfer]



PLP_A_9(3BM5)
?
[Raw transfer]



PLP_A_3(4AEC)
CYSKM_ARATH
[Raw transfer]



PLP_C_14(1FCJ)
CYSK_SALTY
[Raw transfer]



PLP_A_5(4COO)
CBS_HUMAN
[Raw transfer]



PLP_A_7(2ISQ)
CYSK1_ARATH
[Raw transfer]



PLP_A_7(2ISQ)
CYSK1_ARATH
[Raw transfer]



PLP_A_2(2ECO)
?
[Raw transfer]



PLP_B_5(2EFY)
?
[Raw transfer]



PLP_A_4(4PCU)
CBS_HUMAN
[Raw transfer]



PLP_B_7(4PCU)
CBS_HUMAN
[Raw transfer]



PLP_B_8(2BHS)
CYSM_ECOLI
[Raw transfer]



PLP_D_11(2BHS)
CYSM_ECOLI
[Raw transfer]



PLP_A_7(2BHS)
CYSM_ECOLI
[Raw transfer]



PLP_C_9(2BHS)
CYSM_ECOLI
[Raw transfer]



FGA_B_12(4AIR)
?
[Raw transfer]



MPD_A_6(2Q3B)
CYSK_MYCTU
[Raw transfer]



CYS_A_3(4LMB)
?
[Raw transfer]



3HL_A_3(2ECQ)
?
[Raw transfer]
11 PsiBlast_PDB 93.2060% -91 - C3 -1Y7L - CYSK_HAEIN -
14 PsiBlast_PDB 92.8860% -90 - C3 -3IQI - CYSK_HAEIN -
1 PsiBlast_PDB 92.8864% -53 - C3 -5J43 - CYSK_ECOLI -
2 PsiBlast_PDB 92.6964% -54 - C3 -5J5V - CYSK_ECOLI -
8 PsiBlast_PDB 92.6060% -80 - C3 -5DBH 7.7 CYSK_HAEIN
13 PsiBlast_PDB 92.5760% -89 - C3 -3IQH - CYSK_HAEIN -
12 PsiBlast_PDB 92.5660% -90 - C3 -3IQG - CYSK_HAEIN -
15 PsiBlast_PDB 92.0260% -89 - C3 -4HO1 - CYSK_HAEIN -
9 PsiBlast_PDB 91.6859% -88 - C3 -4ORE - CYSK_HAEIN -
16 PsiBlast_PDB 91.5260% -83 - C3 -4LI3 - CYSK_HAEIN -
21 PsiBlast_CBE 91.2563% -50 - C3 -1OAS 4.3 CYSK_SALTY
10 PsiBlast_PDB 91.0059% -80 - C3 -4ZU1 - CYSK_HAEIN -
17 PsiBlast_PDB 90.8460% -87 - C3 -4NU8 - CYSK_HAEIN -
7 PsiBlast_PDB 90.7659% -80 - C3 -4ZU6 5.1 CYSK_HAEIN
3 PsiBlast_PDB 90.1463% -49 - C3 -1OAS 4.0 CYSK_SALTY
108 Fugue 89.8363% -49 - C3 -1OAS 4.0 CYSK_SALTY
132 HHSearch 89.5663% -48 - C3 -1D6S 4.9 CYSK_SALTY
5 PsiBlast_PDB 88.9662% -46 - C3 -1D6S 5.1 CYSK_SALTY
25 PsiBlast_CBE 88.8762% -46 - C3 -1D6S 4.9 CYSK_SALTY
22 PsiBlast_CBE 86.3763% -49 - C3 -1FCJ 4.1 CYSK_SALTY
4 PsiBlast_PDB 85.9963% -49 - C3 -1FCJ 3.8 CYSK_SALTY
24 PsiBlast_CBE 85.7363% -47 - C3 -1FCJ 3.5 CYSK_SALTY
23 PsiBlast_CBE 83.9263% -45 - C3 -1FCJ 3.2 CYSK_SALTY
118 HHSearch 79.1755% -27 - C3 -2Q3B 3.8 CYSK_MYCTU
119 HHSearch 78.2356% -0 * C3 *2ISQ 4.0 CYSK1_ARATH
31 PsiBlast_CBE 76.9954% -29 - C3 -3ZEI 6.5 CYSK_MYCTU
120 HHSearch 76.6356% 0 - C3 -1Z7W 4.5 CYSK1_ARATH
137 HHSearch 74.4056% 9 - C3 -4AEC 3.9 CYSKM_ARATH
26 PsiBlast_CBE 73.8455% 7 - C3 -4AEC 4.1 CYSKM_ARATH
139 HHSearch 73.3954% 13 - C3 -4LMA 4.2 ?
33 PsiBlast_CBE 73.2155% 13 - C3 -4LMA 4.2 ?
19 PsiBlast_PDB 73.1258% 3 - C3 -2ISQ 4.0 CYSK1_ARATH
18 PsiBlast_PDB 72.2355% 10 - C3 -4AEC 3.9 CYSKM_ARATH
20 PsiBlast_PDB 71.5158% 7 - C3 -1Z7W 4.5 CYSK1_ARATH
32 PsiBlast_CBE 70.6655% 14 - C3 -4LMA 4.4 ?
134 HHSearch 69.5452% 15 - C3 -4LMB 4.2 ?
48 PsiBlast_CBE 68.7152% 14 - C3 -4LMB 4.2 ?
56 PsiBlast_CBE 67.3147% 10 - C3 -2ECQ 4.1 ?
54 PsiBlast_CBE 67.1947% 14 - C3 -2EFY 3.4 ?
55 PsiBlast_CBE 67.1447% 12 - C3 -2EFY 3.5 ?
58 PsiBlast_CBE 66.8047% 10 - C3 -1VE1 4.1 ?
62 PsiBlast_CBE 66.5643% -23 - C3 -2BHS 3.3 CYSM_ECOLI
53 PsiBlast_CBE 66.3947% -35 - C3 -4AIR 3.4 ?
57 PsiBlast_CBE 66.0047% 7 - C3 -2ECO 4.3 ?
60 PsiBlast_CBE 64.8943% -21 - C3 -2BHS 3.5 CYSM_ECOLI
59 PsiBlast_CBE 64.8343% -24 - C3 -2BHS 3.3 CYSM_ECOLI
61 PsiBlast_CBE 64.4343% -20 - C3 -2BHS 3.7 CYSM_ECOLI
80 PsiBlast_CBE 64.2442% 21 - C3 -4L0D 4.0 CBS_HUMAN
110 Fugue 64.2134% 24 - C3 -3PC3 8.4 ?
77 PsiBlast_CBE 63.9742% 23 - C3 -4COO 4.6 CBS_HUMAN
79 PsiBlast_CBE 63.8342% 21 - C3 -4L0D 3.7 CBS_HUMAN
99 PsiBlast_CBE 63.5342% 19 - C3 -4PCU 3.0 CBS_HUMAN
45 PsiBlast_CBE 63.4345% 30 - C3 -2PQM 4.1 ?
78 PsiBlast_CBE 62.6242% 25 - C3 -4COO 4.7 CBS_HUMAN
44 PsiBlast_CBE 62.5045% 30 - C3 -2PQM 3.7 ?
46 PsiBlast_CBE 62.1745% 28 - C3 -3BM5 2.9 ?
47 PsiBlast_CBE 61.8545% 28 - C3 -3BM5 4.5 ?
98 PsiBlast_CBE 61.5842% 22 - C3 -4PCU 3.5 CBS_HUMAN