@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VP90: (2017-11-20 )
MRKIIHIDMDAFYASVELRERPDLRHLPVVISSHHPRAVIAAASYPAREFGLRSAMSMSQARKLCPQVVIIEPNFEKYRAISAQIHSIFQQYTTLIEPLSLDEAYLDVTENLKQIASATEVAMHIREDIFRQTGLTASAGVAPNKFLAKVASDWNKPNGLFVIKPSQVASFIQDLPLKKIPGVGKVTQEKLQQLELHTLGDLQKIEEAVLVHHFGKYGQQLYLYAQGIDNRPVQAERARQQISKETTFDSDFTLAQCQSYWHGLAEKVWQSLEKKQLNARGVNIKLKLKNFQTLQHSKSFKNPIHSQQDLIQVLFLLLNEMHIPENFQFRLIGVLGFINYKLKLTTFSCLYGECCFFIQKNKF

Atome Classification :

(26 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

1FZ_B_9(4R8U)
?
[Raw transfer]



1FZ_A_8(4R8U)
DPO4_ECOLI
[Raw transfer]



8GT_A_7(5C5J)
?
[Raw transfer]



8GT_A_7(5C5J)
?
[Raw transfer]



DGT_B_11(3RAX)
DPO4_SULSO
[Raw transfer]



DCP_A_9(4IRK)
DPO4_ECOLI
[Raw transfer]



1FZ_F_7(4IR1)
DPO4_ECOLI
[Raw transfer]



DCP_B_7(4IRK)
DPO4_ECOLI
[Raw transfer]



DZ4_F_7(4IRD)
DPO4_ECOLI
[Raw transfer]



0KX_F_10(4Q43)
DPO4_ECOLI
[Raw transfer]



DZ4_A_10(4IRD)
DPO4_ECOLI
[Raw transfer]



0KX_F_7(4IRC)
DPO4_ECOLI
[Raw transfer]



DZ4_A_10(4IRD)
DPO4_ECOLI
[Raw transfer]



TTP_A_9(2OH2)
POLK_HUMAN
[Raw transfer]



DG3_P_5(3BQ1)
DPO4_SULAC
[Raw transfer]



DGT_A_7(2W7O)
POLK_HUMAN
[Raw transfer]



DTP_A_8(5KFZ)
POLH_HUMAN
[Raw transfer]



DTP_A_4(3MFI)
POLH_YEAST
[Raw transfer]



TTP_T_9(4TQR)
DPO4_SULSO
[Raw transfer]



NACID_H_6(4Q44)
DPO4_ECOLI
[Raw transfer]
-
NACID_H_4(4IR1)
DPO4_ECOLI
[Raw transfer]
-
NACID_H_2(4IRC)
DPO4_ECOLI
[Raw transfer]
-
NACID_H_2(4IRD)
DPO4_ECOLI
[Raw transfer]
-
NACID_H_4(5C5J)
?
[Raw transfer]
-
NACID_H_4(4IR9)
DPO4_ECOLI
[Raw transfer]
-
NACID_H_6(4Q43)
DPO4_ECOLI
[Raw transfer]
-
NACID_H_4(4Q45)
DPO4_ECOLI
[Raw transfer]
-
NACID_G_3(4IRK)
DPO4_ECOLI
[Raw transfer]
-
NACID_F_6(4IRK)
DPO4_ECOLI
[Raw transfer]
-
NACID_C_4(4Q43)
DPO4_ECOLI
[Raw transfer]
-
NACID_C_6(5C5J)
?
[Raw transfer]
-
NACID_C_4(4IRC)
DPO4_ECOLI
[Raw transfer]
-
NACID_C_3(4IR9)
DPO4_ECOLI
[Raw transfer]
-
NACID_C_6(4Q45)
DPO4_ECOLI
[Raw transfer]
-
NACID_C_6(4IR1)
DPO4_ECOLI
[Raw transfer]
-
NACID_C_4(4Q44)
DPO4_ECOLI
[Raw transfer]
-
NACID_C_4(4IRD)
DPO4_ECOLI
[Raw transfer]
-
54 HHSearch 71.3726% -9 - C1 -3OSN - POLI_HUMAN -
47 HHSearch 71.3644% 13 - C1 -5C5J 2.5 ?
45 HHSearch 69.5145% 10 - C1 -4IRD 4.4 DPO4_ECOLI
28 PsiBlast_CBE 69.0246% 9 - C1 -4IRK 3.8 DPO4_ECOLI
9 PsiBlast_PDB 68.8746% 13 - C1 -4Q44 6.4 DPO4_ECOLI
5 PsiBlast_PDB 68.7047% 8 - C1 -4R8U 4.7 ?
1 PsiBlast_PDB 68.6947% 9 - C1 -4IR1 4.5 DPO4_ECOLI
10 PsiBlast_PDB 68.6246% 7 - C1 -4Q45 4.8 DPO4_ECOLI
25 PsiBlast_CBE 68.2047% 14 - C1 -4R8U 3.6 DPO4_ECOLI
22 PsiBlast_CBE 68.1347% 9 - C1 -4Q43 4.4 DPO4_ECOLI
21 PsiBlast_CBE 68.1247% 11 - C1 -5C5J 6.5 ?
8 PsiBlast_PDB 68.0546% 10 - C1 -4IRK 3.7 DPO4_ECOLI
6 PsiBlast_PDB 67.7846% 11 - C1 -4IRC 5.6 DPO4_ECOLI
3 PsiBlast_PDB 67.2547% 16 - C1 -4Q43 5.6 DPO4_ECOLI
2 PsiBlast_PDB 67.2447% 13 - C1 -4IR9 4.5 DPO4_ECOLI
24 PsiBlast_CBE 66.9647% 16 - C1 -4IR1 4.8 DPO4_ECOLI
7 PsiBlast_PDB 66.9446% 14 - C1 -4IRD 5.8 DPO4_ECOLI
26 PsiBlast_CBE 66.7446% 13 - C1 -4Q45 4.3 DPO4_ECOLI
23 PsiBlast_CBE 66.2047% 10 - C1 -4IR9 6.7 DPO4_ECOLI
43 HHSearch 65.8330% 0 - C1 -3GQC - REV1_HUMAN -
27 PsiBlast_CBE 65.8146% 11 - C1 -4Q44 4.6 DPO4_ECOLI
4 PsiBlast_PDB 65.5647% 15 - C1 -5C5J 4.6 ?
30 PsiBlast_CBE 65.3246% 14 - C1 -4IRC 7.4 DPO4_ECOLI
29 PsiBlast_CBE 64.5546% 15 - C1 -4IRD 5.6 DPO4_ECOLI
68 Fugue 63.9135% 42 - C1 -2OH2 5.3 POLK_HUMAN
70 Fugue 61.5934% 35 - C1 -2W7O 4.6 POLK_HUMAN