@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VP93: (2017-11-20 )
MNSVLTMAVNDSPITSVKTTQPLIALYCGSRAGNNPIYREKAIELASGIAEQGFGLVYGGASIGLMGQVAESVLAHGGEAVGVIPEFMLDYEVAHAGLTELHVVETMHERKAMMAERASAFIALPGGLGTFEEILEIATWGQLNQHQKPMILYNVNGFYNALIAQLDHAVQEGFLPLQHRAKLIVCEEIDQIYNVIKNLKMPKRFVV

Atome Classification :

(25 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

TAR_A_7(5AJT)
?
[Raw transfer]



TAR_A_7(5AJT)
?
[Raw transfer]



TAR_C_11(5AJT)
?
[Raw transfer]



RP5_A_2(5AJU)
?
[Raw transfer]



TAR_B_9(5AJT)
?
[Raw transfer]



GOL_C_11(5ITS)
?
[Raw transfer]



SRT_D_13(5AJT)
?
[Raw transfer]



GOL_A_6(5ITS)
?
[Raw transfer]



EDO_A_5(2Q4D)
LOG8_ARATH
[Raw transfer]



GOL_C_12(5ITS)
?
[Raw transfer]



GOL_A_7(5ITS)
?
[Raw transfer]



EDO_A_7(1YDH)
LOG8_ARATH
[Raw transfer]



GOL_C_12(5ITS)
?
[Raw transfer]



EDO_A_7(1YDH)
LOG8_ARATH
[Raw transfer]



UNL_A_3(3QUA)
?
[Raw transfer]



UNL_B_4(3QUA)
?
[Raw transfer]



UNL_A_3(3QUA)
?
[Raw transfer]
36 HHSearch 97.9240%-150 * C3 *5ITS - ? -
21 PsiBlast_CBE 96.2741%-165 - C3 -5ITS - ? -
23 PsiBlast_CBE 94.6241%-162 - C3 -5ITS - ? -
49 HHSearch 94.0139%-146 - C3 -3QUA 2.8 ?
37 HHSearch 94.0040%-149 - C3 -5ITS 2.0 ?
43 HHSearch 93.4642%-137 - C3 -1T35 - YVDD_BACSU -
2 PsiBlast_PDB 92.4741%-155 - C3 -5ITS 3.3 ?
22 PsiBlast_CBE 92.3241%-157 - C3 -5ITS 3.0 ?
38 HHSearch 92.2238%-141 - C3 -2A33 - LOG3_ARATH -
41 HHSearch 91.6037%-155 - C3 -1YDH 3.2 LOG8_ARATH
1 PsiBlast_PDB 89.9241%-146 - C3 -1T35 - YVDD_BACSU -
44 HHSearch 89.8535%-165 - C3 -3SBX - LOGH_MYCMM -
24 PsiBlast_CBE 89.1639%-141 - C3 -3QUA 2.8 ?
3 PsiBlast_PDB 89.1539%-135 - C3 -3QUA 2.8 ?
42 HHSearch 89.0842%-136 - C3 -1T35 - YVDD_BACSU -
35 HHSearch 87.8836% -49 - C3 -5AJT 4.1 ?
8 PsiBlast_PDB 84.9143%-163 - C3 -2Q4D 3.6 LOG8_ARATH
7 PsiBlast_PDB 83.8543%-169 - C3 -1YDH 3.2 LOG8_ARATH
34 PsiBlast_CBE 81.7637% -36 - C3 -3SBX - LOGH_MYCMM -
28 PsiBlast_CBE 81.6737% -31 - C3 -3SBX - LOGH_MYCMM -
27 PsiBlast_CBE 80.8436% -61 - C3 -5AJT 3.4 ?
25 PsiBlast_CBE 80.7936% -62 - C3 -5AJT 3.5 ?
26 PsiBlast_CBE 80.5236% -59 - C3 -5AJT 2.5 ?
5 PsiBlast_PDB 80.4236% -59 - C3 -5AJU 2.8 ?
4 PsiBlast_PDB 79.5436% -56 - C3 -5AJT 4.1 ?