@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VPS0: (2017-11-22 )
MGHSVALNFADGKTFFISVNKDELLLDAAVRQGINLPLDCREGVCGTCQGQCETGIYEQEYVDEDALSERDLAERKMLACQTRVKSDAAFYFDHDSAICNAGDTLKIETQVTAVELVSETTAILHLDASNHAEQLQFLPGQYARLQIPDTEDWRSYSFANRPNATNQLQFLIRLLPDGVMSNYLRDRCQVGQSLLIEAPLGSFYLREVERPLVFVAGGTGLSAFLGMLDNLVEQPNSPTVQFYYGVNSETDLCEQQRLHAYAEQLPNFSYHPIVTKATETWQGKAGYIHEHLNKDQLAEQAFDMYLCGPPPMIEAVKNWLDEQALQNYRIYSEKFLQSNTSR

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

GOL_A_12(2EIX)
?
[Raw transfer]



FAD_B_11(1KRH)
BENC_ACIAD
[Raw transfer]



FAD_A_9(1KRH)
BENC_ACIAD
[Raw transfer]



FDA_A_2(1TVC)
MMOC_METCA
[Raw transfer]



GOL_B_11(2EIX)
?
[Raw transfer]
102 HHSearch 72.5339% -34 - C1 -1KRH - BENC_ACIAD -
1 PsiBlast_PDB 70.3440% -22 - C1 -1KRH 11.9 BENC_ACIAD
21 PsiBlast_CBE 69.5740% -20 - C1 -1KRH 11.4 BENC_ACIAD
3 PsiBlast_PDB 56.7827% -72 - C1 -4WQM - TMOF_PSEME -
103 HHSearch 56.6826% -31 - C1 -4WQM - TMOF_PSEME -
104 HHSearch 55.1924% -14 - C1 -4P6V - NQRF_VIBCH -
108 HHSearch 47.2124% -20 - C1 -2R6H - ? -
107 HHSearch 46.6624% -16 * C1 *2R6H - ? -
109 HHSearch 46.1125% -13 - C1 -4U9U - NQRF_VIBCH -
106 HHSearch 44.5235% 4 - C1 -1TVC - MMOC_METCA -
2 PsiBlast_PDB 44.1535% 16 - C1 -1TVC 4.3 MMOC_METCA
105 HHSearch 43.4222% -92 - C1 -1QFJ - FRE_ECOLI -
119 HHSearch 42.5124% -21 - C1 -1CQX - HMP_CUPNH -
4 PsiBlast_PDB 41.9023% 9 - C1 -4P6V - NQRF_VIBCH -
9 PsiBlast_PDB 41.5521% -5 - C1 -2R6H - ? -
116 HHSearch 41.3721% -20 - C1 -4K1X - ? -
121 HHSearch 41.1725% -7 - C1 -5UFA - ? -
111 HHSearch 40.9521% -11 - C1 -2BGI - ? -
113 HHSearch 39.7321% -12 - C1 -2QDX - ? -
115 HHSearch 39.3822% -17 - C1 -4B4D - ? -