@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VPT6: (2017-11-23 )
MSTTVIILAAGKGTRMRSQLPKVLQPLAGRPLLGHVIKTAKQLLAENIITIYGHGGDHVKKTFAQENIQWVEQAEQLGTGHAVQMTLPVLPKDGISLILYGDVPLARQTTLEQLIEASNKTGIGMITLHVDNPTGYGRIVRQDGKIQAIVEHKDATEAQRQIQEINTGIYCVSNAKLHEWLPKLSNENAQGEYYLTDIVAMAVADGLEIASIQPELAFEVEGVNDRLQLAALEREFQKQQAKELMQQGVTFADPARFDLRGTVKVGHDVRIDVNVIIEGDCELGDFVEIGAGCILKNTTIAAGTKVQAYSVFDGAVVGENTQIGPFARLRPGAKLANEVHIGNFVEVKNTTIGLGSKANHFTYLGDAEIGAESNIGAGTITCNYDGANKHKTTIGDAVFIGSNSSLVAPVTIGNGATVGAGSVITKDVAEQSLSFERAQQISKANYQRPQKLKK

Atome Classification :

(25 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

GOB_A_4(3TWD)
GLMU_ECOLI
[Raw transfer]




ACO_B_12(2OI5)
GLMU_ECOLI
[Raw transfer]




ACO_A_11(2OI5)
GLMU_ECOLI
[Raw transfer]




COA_B_12(2OI6)
GLMU_ECOLI
[Raw transfer]




DCA_A_10(2OI7)
GLMU_ECOLI
[Raw transfer]




COA_A_11(2OI6)
GLMU_ECOLI
[Raw transfer]




DCA_B_11(2OI7)
GLMU_ECOLI
[Raw transfer]




GOB_A_4(3TWD)
GLMU_ECOLI
[Raw transfer]




PG4_A_10(4KPX)
GLMU_HAEIN
[Raw transfer]




PG4_A_5(4E1K)
GLMU_HAEIN
[Raw transfer]




CIT_C_9(5VMK)
?
[Raw transfer]




GN1_B_4(2OI7)
GLMU_ECOLI
[Raw transfer]




GP1_B_4(2OI6)
GLMU_ECOLI
[Raw transfer]




GP1_B_4(2OI6)
GLMU_ECOLI
[Raw transfer]




GN1_A_3(2OI7)
GLMU_ECOLI
[Raw transfer]




CIT_B_6(5VMK)
?
[Raw transfer]




EDO_A_5(4FCE)
GLMU_YERPE
[Raw transfer]




GP1_A_5(3ST8)
GLMU_MYCTU
[Raw transfer]




GP1_A_3(2OI6)
GLMU_ECOLI
[Raw transfer]




1 PsiBlast_PDB 86.4699%-121 - C3 -5VMK - ? -
21 PsiBlast_CBE 83.2599%-130 - C3 -5VMK 3.5 ?
126 HHSearch 78.1496% -57 - C3 -5VMK 3.4 ?
17 PsiBlast_PDB 75.7357%-127 - C3 -4FCE 3.3 GLMU_YERPE
20 PsiBlast_PDB 75.7255%-118 - C3 -2OI6 3.2 GLMU_ECOLI
11 PsiBlast_PDB 75.6956%-126 - C3 -4E1K 2.5 GLMU_HAEIN
14 PsiBlast_PDB 75.6756%-125 - C3 -4KPX 1.5 GLMU_HAEIN
127 HHSearch 75.5556%-116 - C3 -2OI6 2.6 GLMU_ECOLI
5 PsiBlast_PDB 75.5456%-122 - C3 -2V0J - GLMU_HAEIN -
15 PsiBlast_PDB 75.5156%-122 - C3 -4KPZ - GLMU_HAEIN -
7 PsiBlast_PDB 75.4856%-126 - C3 -2V0L - GLMU_HAEIN -
8 PsiBlast_PDB 75.4656%-121 - C3 -2VD4 - GLMU_HAEIN -
3 PsiBlast_PDB 75.4156%-122 - C3 -2V0H - GLMU_HAEIN -
16 PsiBlast_PDB 75.3756%-123 - C3 -4KQL - GLMU_HAEIN -
19 PsiBlast_PDB 75.3455%-119 - C3 -2OI5 3.6 GLMU_ECOLI
13 PsiBlast_PDB 75.3356%-123 - C3 -4KNX - GLMU_HAEIN -
10 PsiBlast_PDB 75.2056%-123 - C3 -2W0W - GLMU_HAEIN -
24 PsiBlast_CBE 75.1355%-117 * C3 *2OI6 3.1 GLMU_ECOLI
6 PsiBlast_PDB 75.1356%-125 - C3 -2V0K - GLMU_HAEIN -
25 PsiBlast_CBE 74.7955%-117 - C3 -2OI5 3.9 GLMU_ECOLI
23 PsiBlast_CBE 74.7755%-117 - C3 -2OI7 4.4 GLMU_ECOLI
22 PsiBlast_CBE 73.8755%-113 - C3 -2OI7 4.5 GLMU_ECOLI
46 PsiBlast_CBE 59.0839% -19 - C3 -3ST8 3.7 GLMU_MYCTU
53 PsiBlast_CBE 48.0656%-116 - C3 -3TWD 4.2 GLMU_ECOLI
143 HHSearch 46.0156%-114 - C3 -3TWD 3.8 GLMU_ECOLI