@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VPV2: (2017-11-23 )
MTTTTTKFRDVEIRAPRGTELMAKSWLTEAPLRMLMNNLDPDVAENPKELVVYGGIGRAARNWECFDKIVDTLKNLETDETLLVQSGKPVGVFKTHKDAPRVLIANSNLVPHWANWEHFNELDAKALAMYGQMTAGSWIYIGSQGIVQGTYETFVEAGRQHYNGDLKGRWVLTAGLGGMGGAQPLAATLAGACSLNIECQQASIDFRLRTRYVDEQATDLDDALARIDRYTKEGKAISIALHGNAAEILPELVRRGVRPDMVTDQTSAHDPLNGYLPVGWTWDEYRERAKKEPEAVVKAAKQSMAKHVQAMLDFQKMGVPTFDYGNNIRQMAKEEGVANAFDFPGFVPAYIRPLFCRGIGPFRWAALSGDPEDIYKTDAKVKELIPDDEHLHHWLDMARERISFQGLPARICWVGLGLRAKLGLAFNEMVRSGELSAPIVIGRDHLDSGSVASPNRETEAMQDGSDAVSDWPLLNALLNTAGGATWVSLHHGGGVGMGFSQHSGVVIVCDGTDEAAARIARVLTNDPATGVMRHADAGYEIAINCAKEQGLHLPMITQ

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NAD_B_4(1UWL)
HUTU_PSEPU
[Raw transfer]



NAD_A_3(1W1U)
HUTU_PSEPU
[Raw transfer]



NAD_A_3(1UWK)
HUTU_PSEPU
[Raw transfer]



NAD_A_3(1UWK)
HUTU_PSEPU
[Raw transfer]



NAD_A_3(1UWL)
HUTU_PSEPU
[Raw transfer]



NAD_A_3(1UWK)
HUTU_PSEPU
[Raw transfer]



NAD_B_5(1UWK)
HUTU_PSEPU
[Raw transfer]



NAD_B_5(1W1U)
HUTU_PSEPU
[Raw transfer]



NAD_B_5(1UWK)
HUTU_PSEPU
[Raw transfer]
13 PsiBlast_CBE 89.3390% -72 - C5 -2V7G - HUTU_PSEPU -
40 Fugue 88.5190% -64 - C5 -1UWK 12.8 HUTU_PSEPU
21 HHSearch 88.4890% -64 - C5 -1UWK 12.6 HUTU_PSEPU
11 PsiBlast_CBE 88.4890% -64 - C5 -1UWK 12.6 HUTU_PSEPU
20 HHSearch 88.4290% -64 - C5 -1UWK 12.8 HUTU_PSEPU
2 PsiBlast_PDB 88.4290% -64 - C5 -1UWK 12.8 HUTU_PSEPU
15 PsiBlast_CBE 88.3590% -64 - C5 -2V7G - HUTU_PSEPU -
14 PsiBlast_CBE 88.2590% -72 - C5 -2V7G - HUTU_PSEPU -
4 PsiBlast_PDB 88.2490% -64 - C5 -2V7G - HUTU_PSEPU -
10 PsiBlast_CBE 87.9290% -66 - C5 -1UWL 13.8 HUTU_PSEPU
12 PsiBlast_CBE 87.6490% -64 - C5 -1W1U 12.8 HUTU_PSEPU
3 PsiBlast_PDB 87.4890% -64 - C5 -1W1U 13.3 HUTU_PSEPU
1 PsiBlast_PDB 87.3590% -61 - C5 -1UWL 13.8 HUTU_PSEPU
16 PsiBlast_CBE 79.6865% -64 - C5 -2FKN - HUTU_BACSU -
17 PsiBlast_CBE 79.5865% -62 - C5 -2FKN - HUTU_BACSU -
23 HHSearch 79.5164% -67 - C5 -2FKN - HUTU_BACSU -
22 HHSearch 79.5064% -62 * C5 *2FKN - HUTU_BACSU -
18 PsiBlast_CBE 79.4165% -67 - C5 -2FKN - HUTU_BACSU -
5 PsiBlast_PDB 79.3365% -65 - C5 -2FKN - HUTU_BACSU -
41 Fugue 37.6013%-148 - C5 -3WMI - ? -