@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VQ19: (2017-11-24 )
MRRFSCIVGSVFLAMTQAQAELVINGSTISSNATVPVTNSDTYTPNNNFQSCLANLRSQAIAAGVSGSTYDRYTQNLTPDYSVIDKLNYQPEFSTPIWDYLSGLVDEERVALGKQKLAQHRDVLNRASQVYGVPAETIVAVWGVESNFGDISGKYPLLQALGTLSCEGRRQSYFRTEFFATMRILRRGDLTEDQLKGSWAGAFGHTQFMPSTYERLAVDFDGDGRRDLVSSTADALASTANFLNKAGWQTGMPWGFEVQIPAGMSIDGEGRRSKKPLSSWSARGVTRIDGSPLIQGPLFGSTPAGLMAPAGPSGPVFLVFKNFDAIYSYNAAESYGLAIAHLSDRLRGAGPFVSSWPTDDPGTSRAERREIQQFLINRGYDIGAVDGLIGDKTRVAIRQEQTRLGLNPTGRAGQQILRAFRQEQARKMMQ

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

BLG_A_4(1D0M)
MLTB_ECOLI
[Raw transfer]



BLG_A_3(1D0L)
MLTB_ECOLI
[Raw transfer]



NAG_A_5(5AO7)
?
[Raw transfer]



BCN_A_3(1QUS)
MLTB_ECOLI
[Raw transfer]



BCN_A_3(1LTM)
MLTB_ECOLI
[Raw transfer]



NAG_A_2(1QUT)
MLTB_ECOLI
[Raw transfer]



BCN_A_3(1QUS)
MLTB_ECOLI
[Raw transfer]



GOL_A_4(1QDT)
MLTB_ECOLI
[Raw transfer]



SUGAR_A_2(1D0K)
MLTB_ECOLI
[Raw transfer]
-
NAG_A_4(5AO7)
?
[Raw transfer]



SUGAR_A_4(5AO8)
?
[Raw transfer]
-
TRS_A_6(5AO7)
?
[Raw transfer]



PEG_A_3(5ANZ)
?
[Raw transfer]



DGL_A_6(1D0K)
MLTB_ECOLI
[Raw transfer]



PEG_A_4(5ANZ)
?
[Raw transfer]



EDO_A_4(1QDR)
MLTB_ECOLI
[Raw transfer]



EDO_A_3(1QDT)
MLTB_ECOLI
[Raw transfer]



ALA_A_5(1D0K)
MLTB_ECOLI
[Raw transfer]



ALA_A_7(1D0K)
MLTB_ECOLI
[Raw transfer]
3 PsiBlast_PDB 92.1342% -77 - C3 -5AO7 2.8 ?
1 PsiBlast_PDB 91.2642% -76 - C3 -5AO8 3.9 ?
25 HHSearch 91.2242% -76 - C3 -5AO7 2.8 ?
2 PsiBlast_PDB 91.1142% -75 - C3 -5ANZ 2.3 ?
47 Fugue 90.6642% -74 - C3 -5ANZ - ? -
24 HHSearch 90.1442% -74 - C3 -5ANZ - ? -
26 HHSearch 66.3029% -39 * C3 *4ANR - ? -
48 Fugue 64.1928% -33 - C3 -1QUS - MLTB_ECOLI -
28 HHSearch 62.9331% -10 - C3 -1D0L - MLTB_ECOLI -
10 PsiBlast_PDB 62.5135% -32 - C3 -1D0M 5.4 MLTB_ECOLI
5 PsiBlast_PDB 62.5035% -32 - C3 -1QUT 2.7 MLTB_ECOLI
8 PsiBlast_PDB 62.4735% -30 - C3 -1D0K 4.0 MLTB_ECOLI
12 PsiBlast_PDB 62.3832% -30 - C3 -4ANR - ? -
4 PsiBlast_PDB 62.2835% -31 - C3 -1QUS 2.5 MLTB_ECOLI
9 PsiBlast_PDB 62.2435% -32 - C3 -1D0L 5.4 MLTB_ECOLI
27 HHSearch 62.1531% -9 - C3 -1QUS 2.5 MLTB_ECOLI
6 PsiBlast_PDB 61.9935% -30 - C3 -1QDR 1.8 MLTB_ECOLI
11 PsiBlast_PDB 61.7335% -29 - C3 -1LTM 2.5 MLTB_ECOLI
7 PsiBlast_PDB 61.4335% -29 - C3 -1QDT 2.2 MLTB_ECOLI
33 HHSearch 46.5721% -82 - C3 -4CFP - MLTC_ECOLI -