@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VQ68: (2017-11-25 )
MSQHLSLPKDKIRFLLLEGVHQNAVDTLNAAGYTNIDYRKTALEGEALKEAIKDAHFIGIRSRTQLTEEVFEAANKLIAVGCFCIGTNQVDLKAAMARGIPVFNAPYSNTRSVAELVLAETILLLRRVPEKSAACHRGGWDKSAVGSFETRGKTLGIVGYGSIGSQLSVLAESMGMNVIYYDAVTKLPMGNARQVGSLDELLATADVVTLHIPDVPSTRNFFTKEQFAKMKEGAIFLNAARGTCVVIEDLADAIKSGHLAGAAVDVFPKEPKANGEEFQSPLRGLDNVILTPHVGGSTMEAQANIGLEVAEKFVAYSDKGMTLSAVNFPEIALPLTAGQHRLLHIHKNVPGVLSKINNLFAEQGINISGQSLMTKGDIGYLVMDVDASASQEALDMLHEVEGTIRVRVLF

Atome Classification :

(24 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

EPE_A_2(5BQF)
?
[Raw transfer]




NAI_G_7(2P9C)
SERA_ECOLI
[Raw transfer]




NAI_F_6(2P9G)
SERA_ECOLI
[Raw transfer]




NAD_B_9(1PSD)
SERA_ECOLI
[Raw transfer]




NAI_E_5(2P9C)
SERA_ECOLI
[Raw transfer]




NAD_A_5(1PSD)
SERA_ECOLI
[Raw transfer]




NAI_A_3(2PA3)
SERA_ECOLI
[Raw transfer]




NAI_E_5(2P9G)
SERA_ECOLI
[Raw transfer]




GOL_A_4(3K5P)
?
[Raw transfer]




GOL_A_3(3K5P)
?
[Raw transfer]




GOL_A_8(3JTM)
FDH_ARATH
[Raw transfer]




HPV_B_6(3DDN)
SERA_MYCTU
[Raw transfer]




OXD_B_6(5TSD)
?
[Raw transfer]




OXD_A_4(5TSD)
?
[Raw transfer]




25 PsiBlast_CBE 88.2160%-112 - C1 -2P9C 10.2 SERA_ECOLI
3 PsiBlast_PDB 88.1360%-113 - C1 -2P9E - SERA_ECOLI -
21 PsiBlast_CBE 87.9861%-115 - C1 -1PSD 9.5 SERA_ECOLI
6 PsiBlast_PDB 87.2560%-119 - C1 -1YBA - SERA_ECOLI -
1 PsiBlast_PDB 87.2261%-112 - C1 -1PSD 10.2 SERA_ECOLI
24 PsiBlast_CBE 86.9260%-113 - C1 -2P9E - SERA_ECOLI -
23 PsiBlast_CBE 86.8360%-112 - C1 -2P9E - SERA_ECOLI -
2 PsiBlast_PDB 86.7560%-117 - C1 -2P9C 9.3 SERA_ECOLI
22 PsiBlast_CBE 86.5860%-118 - C1 -2P9E - SERA_ECOLI -
4 PsiBlast_PDB 86.4460%-113 - C1 -2PA3 9.9 SERA_ECOLI
26 PsiBlast_CBE 86.3260%-115 - C1 -2P9G 9.7 SERA_ECOLI
5 PsiBlast_PDB 85.6960%-115 - C1 -2P9G 9.5 SERA_ECOLI
119 HHSearch 84.6057%-110 - C1 -3K5P 3.2 ?
7 PsiBlast_PDB 84.0760%-116 - C1 -1SC6 - SERA_ECOLI -
8 PsiBlast_PDB 83.9456%-109 - C1 -3K5P 2.5 ?
118 HHSearch 76.2260% -40 - C1 -2P9E - SERA_ECOLI -
120 HHSearch 72.8961% -45 - C1 -1SC6 - SERA_ECOLI -
132 HHSearch 59.6333% -68 - C1 -1YGY - SERA_MYCTU -
125 HHSearch 59.5233% -71 - C1 -3DDN - SERA_MYCTU -
138 Fugue 57.8732% -63 - C1 -1YGY - SERA_MYCTU -
116 PsiBlast_CBE 34.7432% -48 - C1 -5BQF Error ?
114 PsiBlast_CBE 34.4632% -51 - C1 -5TSD 3.8 ?
115 PsiBlast_CBE 34.2932% -49 - C1 -5TSD 3.8 ?
54 PsiBlast_CBE 31.3333% -10 - C1 -3JTM 2.4 FDH_ARATH