@TOME V2.3
(Mar 2018)

Ref. - - Doc.
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VQB1: (2017-11-26 )
MPAYKAPLHDIRFLMNEVLDYPAHYKTLSNGESADPDTVDMILEGAADYCENVLSPLNQSGDEEGCHFDNGEVKTPKGFKEAYDQFVMGGWQGLSYPEEFGGQGLPMSLNLIKSEMMGTANWSFTMYPGLSSGCMNTILQFGTDEQKQTYMPKLVEGTWSGTMCLTEPQCGTDLGQVKTKAEPQADGTYKISGTKIFISAGEHDLTENIIHIVLARLPDAPAGTRGISLFIVPKFIPTAEGGVGERNTVSCGSIEHKMGIRASATAVLNFDNATGYLIGEVNKGLHAMFTFMNTARIGTAVQGIAHAELSFQGALPYAKERMSMRALSGKKDPDKVADAIIHHADVRRMLLTQKAIAEGGRSMIYYAAQLADKMTDALTRGDQAAFEDYDDKLGFYTPILKGFLTELGLEAANHGMQVYGGHGYIKEWGMEQIVRDARISTLYEGTTGVQALDLIGRKVLLSSKGKVVREYTAEILKFCAAHARNKYLRRFAWDLTKLCAQWNTLTVRIMLAARKDRDIVSSASVDFLMFSGYVMMAYFWAQQAVVASEKLEAGNGQETPEFYKAKIKVADFYFDRLLPRAQGHAESMVTTSRTLTSLPAEHFSFDY

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

FAD_A_9(1BUC)
ACDS_MEGEL
[Raw transfer]



FAD_A_3(4L1F)
?
[Raw transfer]



FDA_A_3(4N5F)
?
[Raw transfer]
25 HHSearch 76.7524% -17 - C1 -2UXW - ACADV_HUMAN -
46 Fugue 76.3421% -37 - C1 -2Z1Q - ? -
24 HHSearch 75.5124% -11 - C1 -3B96 - ACADV_HUMAN -
26 HHSearch 75.0522% -13 - C1 -3OWA - ? -
36 HHSearch 74.9225% -62 - C1 -1RX0 - ACAD8_HUMAN -
13 PsiBlast_PDB 74.2329% 0 - C- -3B96 - ACADV_HUMAN -
35 HHSearch 73.4925% -62 - C1 -1RX0 - ACAD8_HUMAN -
27 HHSearch 72.8922% -5 - C1 -3OWA - ? -
30 HHSearch 72.8523% -16 * C1 *2Z1Q - ? -
5 PsiBlast_PDB 71.5826% -38 - C1 -2JIF - ACDSB_HUMAN -
44 Fugue 71.0530% -6 - C1 -1BUC - ACDS_MEGEL -
48 Fugue 69.6619% 3 - C1 -4Y9J - ACD11_CAEEL -
2 PsiBlast_PDB 68.7829% -25 - C1 -4L1F 9.3 ?
16 PsiBlast_PDB 68.4328% -58 - C1 -4IV6 - ? -
4 PsiBlast_PDB 68.4028% -51 - C1 -3NF4 - ? -
45 Fugue 67.9220% -7 - C1 -2UXW - ACADV_HUMAN -
22 PsiBlast_CBE 67.3531% -19 - C1 -4U83 - ? -
23 PsiBlast_CBE 67.2731% -18 - C1 -4U83 - ? -
11 PsiBlast_PDB 66.8327% -40 - C1 -2VIG - ACADS_HUMAN -
1 PsiBlast_PDB 66.2931% -18 - C1 -4U83 - ? -