@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VQB5: (2017-11-26 )
MTKQFAVIGNPIEQSRSPELHHAFAEKTGVDLNYQKRLAPLDGFESSMRSFFAEGGSGMNVTVPFKEQAFALCNVLTERAQIAKAVNTLWMENGKLHGDNTDGQGLVAAIQALEWNLENTTILILGAGGATRGVIYPLVQAGAKKIVIANRTLARAEQLVDDLKTAVPQAQLQAISLNDLEGDFDIVINATSASLSGDALQLPEKLKFKYAYEMAYGKPSSFLDQAKQRNVPYAEGFGMLVGQAIEAFSIWNGVRPQLKDFL

Atome Classification :

(44 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NAP_B_21(1NYT)
AROE_ECOLI
[Raw transfer]



NAP_B_21(1NYT)
AROE_ECOLI
[Raw transfer]



NAP_A_19(1NYT)
AROE_ECOLI
[Raw transfer]



NAP_D_23(1NYT)
AROE_ECOLI
[Raw transfer]



NAP_C_22(1NYT)
AROE_ECOLI
[Raw transfer]



NAP_B_7(2HK9)
AROE_AQUAE
[Raw transfer]



ATR_A_5(2HK9)
AROE_AQUAE
[Raw transfer]



NAP_C_22(1NYT)
AROE_ECOLI
[Raw transfer]



NDP_B_6(3SEF)
AROE_VIBCH
[Raw transfer]



NDP_A_5(3SEF)
AROE_VIBCH
[Raw transfer]



ATR_C_3(1P77)
AROE_HAEIN
[Raw transfer]



SKM_D_8(3PGJ)
AROE_VIBCH
[Raw transfer]



SKM_A_2(3PHH)
AROE_HELPY
[Raw transfer]



SKM_A_2(3PHH)
AROE_HELPY
[Raw transfer]



SKM_B_6(3PGJ)
AROE_VIBCH
[Raw transfer]



SKM_B_4(4FR5)
AROE_HELPY
[Raw transfer]



SKM_A_2(4FOS)
AROE_HELPY
[Raw transfer]



DHK_A_3(3PHJ)
AROE_HELPY
[Raw transfer]



SKM_A_3(4FSH)
AROE_HELPY
[Raw transfer]



DHK_B_4(3PHJ)
AROE_HELPY
[Raw transfer]



SKM_C_7(3PGJ)
AROE_VIBCH
[Raw transfer]



SKM_A_5(2EV9)
AROE_THET8
[Raw transfer]



SKM_C_8(3SEF)
AROE_VIBCH
[Raw transfer]



SKM_A_2(3DOO)
AROE_STAEQ
[Raw transfer]



SKM_B_5(3PHI)
AROE_HELPY
[Raw transfer]



SKM_B_8(2D5C)
AROE_THET8
[Raw transfer]



SKM_B_6(2EV9)
AROE_THET8
[Raw transfer]



SKM_B_4(4FQ8)
AROE_HELPY
[Raw transfer]



SKM_A_3(3PHI)
AROE_HELPY
[Raw transfer]



SKM_A_3(4FR5)
AROE_HELPY
[Raw transfer]



SKM_A_3(4FQ8)
AROE_HELPY
[Raw transfer]



SKM_B_6(2EV9)
AROE_THET8
[Raw transfer]



SKM_B_4(4FQ8)
AROE_HELPY
[Raw transfer]



SKM_A_7(2D5C)
AROE_THET8
[Raw transfer]



SKM_A_7(2D5C)
AROE_THET8
[Raw transfer]



SKM_D_12(2HK9)
AROE_AQUAE
[Raw transfer]



SKM_C_10(2HK9)
AROE_AQUAE
[Raw transfer]



DTV_A_20(1NYT)
AROE_ECOLI
[Raw transfer]
5 PsiBlast_PDB 79.7847% -35 - C4 -4OMU - ? -
6 PsiBlast_PDB 79.6244% -43 - C4 -3PWZ - ? -
70 HHSearch 79.1544% -43 - C4 -3PWZ - ? -
4 PsiBlast_PDB 78.9144% -46 - C4 -1NYT 11.7 AROE_ECOLI
74 HHSearch 78.8245% -39 - C4 -1NYT 11.1 AROE_ECOLI
26 PsiBlast_CBE 78.4844% -44 - C4 -1NYT 11.2 AROE_ECOLI
28 PsiBlast_CBE 77.6944% -40 - C4 -1NYT 11.7 AROE_ECOLI
27 PsiBlast_CBE 77.2644% -40 - C4 -1NYT 11.1 AROE_ECOLI
75 HHSearch 77.0345% -39 - C4 -1NYT 11.7 AROE_ECOLI
8 PsiBlast_PDB 76.7243% -44 - C4 -1P77 6.6 AROE_HAEIN
7 PsiBlast_PDB 75.8543% -50 - C4 -1P74 - AROE_HAEIN -
23 PsiBlast_CBE 75.0445% -34 - C4 -3PGJ 3.1 AROE_VIBCH
3 PsiBlast_PDB 74.6745% -31 - C4 -3O8Q - ? -
24 PsiBlast_CBE 74.6345% -35 - C4 -3PGJ 3.6 AROE_VIBCH
1 PsiBlast_PDB 73.9845% -33 - C4 -3PGJ - AROE_VIBCH -
2 PsiBlast_PDB 72.9145% -32 - C4 -3SEF 7.8 AROE_VIBCH
25 PsiBlast_CBE 72.8345% -30 - C4 -3PGJ 3.2 AROE_VIBCH
22 PsiBlast_CBE 72.6845% -34 - C4 -3SEF 8.2 AROE_VIBCH
11 PsiBlast_PDB 72.3432% -92 - C4 -2HK7 - AROE_AQUAE -
13 PsiBlast_PDB 72.2632% -94 - C4 -2HK9 7.2 AROE_AQUAE
33 PsiBlast_CBE 72.0532% -91 - C4 -2HK9 9.9 AROE_AQUAE
31 PsiBlast_CBE 71.9732% -87 - C4 -2HK9 3.7 AROE_AQUAE
32 PsiBlast_CBE 71.4932% -88 - C4 -2HK9 3.3 AROE_AQUAE
21 PsiBlast_CBE 71.1545% -38 - C4 -3SEF 2.6 AROE_VIBCH
47 PsiBlast_CBE 69.4032% -95 - C4 -2D5C 3.6 AROE_THET8
48 PsiBlast_CBE 67.7232% -80 - C4 -2D5C 3.6 AROE_THET8
45 PsiBlast_CBE 67.2032% -82 - C4 -2EV9 3.4 AROE_THET8
81 HHSearch 66.9932% -79 * C4 *2D5C 3.6 AROE_THET8
46 PsiBlast_CBE 66.8332% -78 - C4 -2EV9 3.3 AROE_THET8
82 HHSearch 66.6332% -81 - C4 -2EV9 3.4 AROE_THET8
10 PsiBlast_PDB 65.7931% -56 - C4 -3DOO 3.3 AROE_STAEQ
76 HHSearch 57.2935% 4 - C4 -4FQ8 3.7 AROE_HELPY
80 HHSearch 56.0735% -2 - C4 -3PHH 4.1 AROE_HELPY
40 PsiBlast_CBE 54.9135% 9 - C4 -4FQ8 3.7 AROE_HELPY
37 PsiBlast_CBE 54.0535% 8 - C4 -4FOS 3.5 AROE_HELPY
38 PsiBlast_CBE 54.0235% 8 - C4 -4FR5 3.6 AROE_HELPY
41 PsiBlast_CBE 53.9935% 10 - C4 -4FQ8 3.3 AROE_HELPY
39 PsiBlast_CBE 53.8535% 8 - C4 -4FR5 3.6 AROE_HELPY
14 PsiBlast_PDB 53.5235% 8 - C4 -4FSH 3.9 AROE_HELPY
17 PsiBlast_PDB 53.0836% 5 - C4 -3PHI 3.9 AROE_HELPY
36 PsiBlast_CBE 52.8936% 4 - C4 -3PHI 3.4 AROE_HELPY
16 PsiBlast_PDB 52.2036% 6 - C4 -3PHH 4.1 AROE_HELPY
18 PsiBlast_PDB 52.1736% 5 - C4 -3PHJ 3.9 AROE_HELPY
35 PsiBlast_CBE 50.5436% 4 - C4 -3PHJ 4.0 AROE_HELPY