@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VQC0: (2017-11-26 )
MELSMSKTFAEFSLHETLQQALEGLGFTNPTPVQEQSIPAALEGKDLLVSSQTGSGKTAAFLLPTLHNLAGQDTFVPFKERMKAVTQPSILVLCPTRELAQQVSQDAIAFVRHMKGVRIAAIMGGMPFGKQIQQLKGAQVVVATPGRLLDLVNRRQLKLDKVDALIVDEADRMLDLGFSEDLEAISDLAVNRGQTLMFSATFADRIIRLAERMMNEPERIAIETGHSTNTDITQTLHWTDGFEHKKKLLTHWLADETLDQAVVFASTQEDTDMLAEELAEAGHSVVALHGAMPQTARNRRLRSIREGRAKILVATDVAARGLDVPTISHVINFGLPMKHEDYVHRIGRTGRAGRTGQAITLATYRERGKIRALEDYLEARLNVSEIEGLEASPPPARPRREGGRGGNGGRDGRRGGGFGGGRRFEGEGNFKRREGGRDDRPRRSFDDKPRGERPAFGGEDRPRREFNSDRPRREGGFEDRPKRSFGGEDRPRREFNSDRPRREGGFEDRPKRSFGGEDRPRREFNSDRPRREGGFNDKPRFDSNDDNRGNRVDYKPRRENGFGDRPQRSFGGEDRPRREGGFGDRPKRSFGGEDRPRRTVREEHFNQESRGERRRKFDR

Atome Classification :

(54 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ANP_A_7(3FHT)
DD19B_HUMAN
[Raw transfer]




ANP_B_12(3FHT)
DD19B_HUMAN
[Raw transfer]




8OD_B_7(3NBF)
?
[Raw transfer]




ANP_A_2(5E7M)
DDX3X_HUMAN
[Raw transfer]




ADP_B_5(4PX9)
DDX3X_HUMAN
[Raw transfer]




ADP_A_3(3PEY)
DBP5_YEAST
[Raw transfer]




ANP_A_3(3G0H)
DD19B_HUMAN
[Raw transfer]




ANP_A_3(3G0H)
DD19B_HUMAN
[Raw transfer]




ADP_A_3(3PEY)
DBP5_YEAST
[Raw transfer]




ADP_A_4(4PX9)
DDX3X_HUMAN
[Raw transfer]




ADP_A_3(3PEW)
DBP5_YEAST
[Raw transfer]




ANP_A_3(3I5X)
MS116_YEAST
[Raw transfer]




ANP_A_3(3SQW)
MS116_YEAST
[Raw transfer]




ANP_A_3(4D25)
?
[Raw transfer]




M2A_A_3(5ELX)
DBP5_YEAST
[Raw transfer]




ANP_A_7(2J0S)
IF4A3_HUMAN
[Raw transfer]




ADP_A_3(4D26)
?
[Raw transfer]




ADP_C_6(4PX9)
DDX3X_HUMAN
[Raw transfer]




ANP_A_3(4D25)
?
[Raw transfer]




ADP_A_3(4D26)
?
[Raw transfer]




8OX_B_6(3MWL)
?
[Raw transfer]




AMP_A_2(5GJU)
?
[Raw transfer]




ADP_A_2(4PXA)
DDX3X_HUMAN
[Raw transfer]




AMP_A_2(2GXQ)
?
[Raw transfer]




AMP_A_3(3BER)
DDX47_HUMAN
[Raw transfer]




AMP_A_2(2I4I)
DDX3X_HUMAN
[Raw transfer]




AMP_A_2(5E7J)
DDX3X_HUMAN
[Raw transfer]




ADP_A_3(2PL3)
DDX10_HUMAN
[Raw transfer]




AMP_A_8(2GXS)
?
[Raw transfer]




ADP_A_3(3DKP)
DDX52_HUMAN
[Raw transfer]




8OD_A_5(3NBF)
?
[Raw transfer]




AMP_A_2(2I4I)
DDX3X_HUMAN
[Raw transfer]




8OP_B_6(3MWK)
?
[Raw transfer]




ADP_A_3(3RRN)
DBP5_YEAST
[Raw transfer]




8OP_D_12(3NBF)
?
[Raw transfer]




AMP_B_9(2GXS)
?
[Raw transfer]




AMP_A_3(4KBF)
?
[Raw transfer]




LMR_A_2(5GVR)
DDX41_HUMAN
[Raw transfer]




1PE_A_4(4BRW)
DHH1_YEAST
[Raw transfer]




IPA_D_4(1XTI)
DX39B_HUMAN
[Raw transfer]




38 PsiBlast_CBE 83.5034%-145 - C4 -2VSO - IF4A_YEAST -
37 PsiBlast_CBE 83.1734%-145 - C4 -2VSO - IF4A_YEAST -
36 PsiBlast_CBE 83.0934%-142 - C4 -2VSX - IF4A_YEAST -
35 PsiBlast_CBE 82.8834%-141 - C4 -2VSX - IF4A_YEAST -
128 HHSearch 81.4735%-142 - C4 -1FUU - IF4A_YEAST -
126 HHSearch 79.5438% -47 - C4 -2DB3 - VASA1_DROME -
132 HHSearch 78.6034% -54 - C4 -4CT4 - DDX6_HUMAN -
17 PsiBlast_PDB 77.6133% -47 - C4 -4CT4 - DDX6_HUMAN -
19 PsiBlast_PDB 77.1933% -51 - C4 -5ANR - DDX6_HUMAN -
28 PsiBlast_CBE 76.8634% -42 - C4 -2HYI - IF4A3_HUMAN -
9 PsiBlast_PDB 76.7734% -47 - C4 -2J0S 9.3 IF4A3_HUMAN
125 HHSearch 76.7343% -42 - C4 -5IVL - ? -
8 PsiBlast_PDB 76.5834% -46 - C4 -2J0Q - IF4A3_HUMAN -
26 PsiBlast_CBE 76.4734% -45 - C4 -2XB2 - IF4A3_HUMAN -
10 PsiBlast_PDB 76.3034% -43 - C4 -2XB2 - IF4A3_HUMAN -
25 PsiBlast_CBE 76.2234% -46 - C4 -2J0Q - IF4A3_HUMAN -
12 PsiBlast_PDB 76.2234% -44 - C4 -2HYI - IF4A3_HUMAN -
14 PsiBlast_PDB 76.0042% -31 - C4 -4KBF 5.2 ?
140 HHSearch 75.9139% -21 - C4 -2I4I 5.7 DDX3X_HUMAN
27 PsiBlast_CBE 75.9134% -42 - C4 -3EX7 - IF4A3_HUMAN -
13 PsiBlast_PDB 75.9134% -47 - C4 -3EX7 - IF4A3_HUMAN -
6 PsiBlast_PDB 75.2638% -19 - C4 -2I4I 5.7 DDX3X_HUMAN
4 PsiBlast_PDB 75.1638% -10 - C4 -5E7J 5.6 DDX3X_HUMAN
7 PsiBlast_PDB 74.5638% -10 - C4 -4PXA 4.4 DDX3X_HUMAN
135 HHSearch 72.3234% -9 - C4 -4D25 8.2 ?
137 HHSearch 71.4232% -17 - C4 -3G0H 7.9 DD19B_HUMAN
134 HHSearch 71.4234% -15 - C4 -4D26 4.7 ?
41 PsiBlast_CBE 71.4132% -34 - C4 -1XTI 3.9 DX39B_HUMAN
5 PsiBlast_PDB 70.2538% 10 - C4 -5E7M 4.3 DDX3X_HUMAN
141 HHSearch 69.0333% -11 - C4 -3PEY 8.2 DBP5_YEAST
46 PsiBlast_CBE 68.1132% -18 - C4 -3PEY 8.1 DBP5_YEAST
45 PsiBlast_CBE 67.9632% -20 - C4 -3PEW 8.1 DBP5_YEAST
43 PsiBlast_CBE 67.4332% -19 - C4 -3RRN 4.7 DBP5_YEAST
50 PsiBlast_CBE 67.2831% -10 - C4 -3FHT 8.3 DD19B_HUMAN
34 PsiBlast_CBE 66.9536% -7 - C4 -4D25 8.1 ?
33 PsiBlast_CBE 66.9336% -13 - C4 -4D26 4.4 ?
51 PsiBlast_CBE 66.3431% -8 - C4 -3G0H 7.9 DD19B_HUMAN
49 PsiBlast_CBE 64.8731% 13 * C4 *3FHT 9.0 DD19B_HUMAN
122 HHSearch 64.7630% 5 - C4 -3I5X 9.6 MS116_YEAST
123 HHSearch 64.5530% 2 - C4 -3SQW 9.3 MS116_YEAST
58 PsiBlast_CBE 58.0044% -68 - C4 -2GXQ 6.1 ?
54 PsiBlast_CBE 57.9245% -79 - C4 -5GJU 4.4 ?
63 PsiBlast_CBE 56.8244% -70 - C4 -3MWL 5.2 ?
56 PsiBlast_CBE 56.7344% -67 - C4 -2GXS 4.8 ?
62 PsiBlast_CBE 56.4344% -59 - C4 -3NBF 4.1 ?
65 PsiBlast_CBE 56.0344% -72 - C4 -3MWK 4.0 ?
78 PsiBlast_CBE 55.3135% -57 - C4 -5GVR 2.0 DDX41_HUMAN
57 PsiBlast_CBE 54.9744% -62 - C4 -2GXS 6.0 ?
75 PsiBlast_CBE 53.9138% -39 - C4 -4PX9 5.7 DDX3X_HUMAN
74 PsiBlast_CBE 53.7738% -39 - C4 -4PX9 5.2 DDX3X_HUMAN
73 PsiBlast_CBE 53.4238% -39 - C4 -4PX9 5.5 DDX3X_HUMAN
87 PsiBlast_CBE 52.6731% -90 - C4 -2PL3 5.9 DDX10_HUMAN
84 PsiBlast_CBE 51.7834% -73 - C4 -3BER 4.9 DDX47_HUMAN
98 PsiBlast_CBE 48.1833% -54 - C4 -3DKP 6.0 DDX52_HUMAN