@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VQE9: (2017-11-26 )
MNRQQIDVLVKQMNIDTAKGEVDARVQQIVVRLLGDLFQAIEDLDIQPSEVWKGLEYFTDAGQANELGLLAAGLGLEHYLDLRADEADAKAGMTGGTPRTIEGPLYVAGAPESVGFAHMDDGTETGKIDTLIIEGTVTDTDGNIIENAKVEVWHANSLGNYSFFDKSQSDFNLRRTIFTDADGKYVALTTMPVGYGCPPEGTTQALLNKLGRHGNRPSHVHYFVSAPGYRKLTTQFNIEGDEYLWDDFAFATRDGLVATAVDVTDPAEIQRRGLDHAFKHITFNIELVKEATAAPSTEVERRRASA

Atome Classification :

(23 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

PIE_A_3(2XSR)
?
[Raw transfer]



PIE_A_3(2XSV)
?
[Raw transfer]



PIE_A_3(2XSV)
?
[Raw transfer]



PTY_A_7(5TD3)
?
[Raw transfer]



PIE_A_3(2XSU)
?
[Raw transfer]



LIO_A_6(1DLM)
CATA_ACIAD
[Raw transfer]



PIE_A_3(2XSU)
?
[Raw transfer]



LIO_B_6(1DMH)
CATA_ACIAD
[Raw transfer]



PG6_A_8(5UMH)
?
[Raw transfer]



PTY_B_10(5TD3)
?
[Raw transfer]



PTY_B_9(5VXT)
?
[Raw transfer]



PTY_B_9(5VXT)
?
[Raw transfer]



PTY_B_10(5TD3)
?
[Raw transfer]



PG4_B_16(5UMH)
?
[Raw transfer]



PG6_A_8(5UMH)
?
[Raw transfer]



EDO_A_12(5UMH)
?
[Raw transfer]



PG6_A_9(5UMH)
?
[Raw transfer]



PG4_B_16(5UMH)
?
[Raw transfer]



PG6_A_9(5UMH)
?
[Raw transfer]
2 PsiBlast_PDB 95.7690% -48 - C8 -2XSV 6.1 ?
3 PsiBlast_PDB 95.7491% -50 - C8 -2XSR 6.3 ?
1 PsiBlast_PDB 94.9890% -49 - C8 -2XSU 6.5 ?
44 HHSearch 85.6487% 7 - C8 -2XSV 6.1 ?
47 HHSearch 85.2287% 5 - C8 -2XSU 6.5 ?
24 PsiBlast_CBE 76.4554% -20 - C8 -1DLM 3.4 CATA_ACIAD
21 PsiBlast_CBE 76.3354% -22 - C8 -1DMH - CATA_ACIAD -
22 PsiBlast_CBE 75.9054% -20 - C8 -1DLT - CATA_ACIAD -
7 PsiBlast_PDB 75.7054% -23 - C8 -1DMH 2.9 CATA_ACIAD
10 PsiBlast_PDB 75.4457% -24 - C8 -5TD3 4.3 ?
5 PsiBlast_PDB 75.4154% -19 - C8 -1DLQ - CATA_ACIAD -
6 PsiBlast_PDB 75.1854% -22 - C8 -1DLT - CATA_ACIAD -
23 PsiBlast_CBE 75.1754% -18 - C8 -1DLQ - CATA_ACIAD -
4 PsiBlast_PDB 74.9554% -18 - C8 -1DLM - CATA_ACIAD -
9 PsiBlast_PDB 74.6650% -34 - C8 -2AZQ - ? -
26 PsiBlast_CBE 73.7957% -26 - C8 -5TD3 6.0 ?
49 HHSearch 72.7651% 16 - C8 -1DLM - CATA_ACIAD -
50 HHSearch 72.1251% 18 - C8 -1DMH - CATA_ACIAD -
8 PsiBlast_PDB 71.8555% 7 - C8 -5UMH 2.8 ?
46 HHSearch 71.6655% -23 - C8 -5UMH 4.2 ?
27 PsiBlast_CBE 70.7357% -5 - C8 -5VXT 6.9 ?
11 PsiBlast_PDB 70.7057% -8 - C8 -5VXT 5.0 ?
25 PsiBlast_CBE 70.0055% 8 - C8 -5UMH 4.2 ?