@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VQF2: (2017-11-26 )
MTLKNAYIIDAIRTPFGRYAGGLASVRADDLGAVPIKALMQRNPNVDWEQVDDVIYGCANQAGEDNRNVGRMSALLAGLPYQVPATTINRLCGSSLDAIAIAARAIKAGEANLVIAGGVESMSRAPYVMGKSDSAFGRSQKIEDTTMGWRFINPKLKELYGVDTMPQTAENVAEQFNVNRADQDQFALVSQQRTASAQAKGFFSKEIVAVEIPQRKGDAVVIDTDEHPRASTTLEGLSKLKPVVKADGTVTAGNASGINDGAAALLIASDDAVQAYNLKPRAKIIASTAVGVEPRIMGFAPAPAIKKLFKQANLTLDQMDVIELNEAFAAQALAVTRDLGLPDNSDKVNPNGGAIALGHPLGASGARLVTTALNQLEQTGGRYALCSMCIGVGQGIALIVERVEAL

Atome Classification :

(28 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

COA_A_3(4XL4)
?
[Raw transfer]



COA_B_9(4XL4)
?
[Raw transfer]



COA_A_5(1WL4)
THIC_HUMAN
[Raw transfer]



COA_A_5(1WL4)
THIC_HUMAN
[Raw transfer]



GOL_B_7(4XL3)
?
[Raw transfer]



GOL_B_14(4XL2)
THLA_CLOAB
[Raw transfer]



GOL_A_3(4XL3)
?
[Raw transfer]



GOL_A_8(4XL2)
THLA_CLOAB
[Raw transfer]



GOL_Q_17(1WL5)
THIC_HUMAN
[Raw transfer]



PEG_A_5(4WYR)
THLA_CLOAB
[Raw transfer]



PEG_B_8(4WYR)
THLA_CLOAB
[Raw transfer]



GOL_A_6(4XL3)
?
[Raw transfer]
121 HHSearch 93.9152% -33 - C6 -1ULQ - ? -
1 PsiBlast_PDB 92.3752% -32 - C6 -1ULQ - ? -
12 PsiBlast_PDB 91.1245% -82 - C6 -4O9C - THIL_CUPNH -
35 PsiBlast_CBE 90.6345% -80 - C6 -4O9C - THIL_CUPNH -
32 PsiBlast_CBE 90.5845% -83 - C6 -4O99 - THIL_CUPNH -
34 PsiBlast_CBE 90.5145% -82 - C6 -4O9C - THIL_CUPNH -
10 PsiBlast_PDB 90.3545% -85 - C6 -4O99 - THIL_CUPNH -
13 PsiBlast_PDB 90.3445% -82 - C6 -4O9A - THIL_CUPNH -
33 PsiBlast_CBE 89.4245% -84 - C6 -4O99 - THIL_CUPNH -
6 PsiBlast_PDB 88.8245% -24 - C6 -4XL3 2.8 ?
11 PsiBlast_PDB 87.8244% -30 - C6 -4C2J - THIM_HUMAN -
9 PsiBlast_PDB 87.7444% -28 - C6 -4C2K - THIM_HUMAN -
5 PsiBlast_PDB 87.6745% -25 - C6 -4N45 - ? -
29 PsiBlast_CBE 87.6144% -28 - C6 -4C2K - THIM_HUMAN -
115 HHSearch 87.5247% -36 - C6 -4O9C - THIL_CUPNH -
2 PsiBlast_PDB 87.4646% -30 - C6 -4WYR 2.3 THLA_CLOAB
129 HHSearch 87.3747% -38 - C6 -4O9A - THIL_CUPNH -
130 HHSearch 87.3243% -44 * C6 *1WL4 6.9 THIC_HUMAN
74 PsiBlast_CBE 87.1244% -36 - C6 -5F0V - ATOB_ECOLI -
30 PsiBlast_CBE 87.0144% -29 - C6 -4C2K - THIM_HUMAN -
21 PsiBlast_CBE 86.8246% -28 - C6 -4WYR 2.1 THLA_CLOAB
7 PsiBlast_PDB 86.6545% -24 - C6 -4XL4 6.2 ?
24 PsiBlast_CBE 86.5445% -25 - C6 -4XL4 6.2 ?
25 PsiBlast_CBE 86.4145% -23 - C6 -4XL3 2.4 ?
16 PsiBlast_PDB 86.2843% -45 - C6 -1WL4 6.9 THIC_HUMAN
17 PsiBlast_PDB 85.7743% -47 - C6 -1WL5 2.4 THIC_HUMAN
22 PsiBlast_CBE 85.2846% -26 - C6 -4XL2 2.4 THLA_CLOAB
4 PsiBlast_PDB 84.1546% -25 - C6 -4XL2 2.4 THLA_CLOAB