@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VQH8: (2017-11-27 )
MRHLHHQTSQTKLWAVIPAAGSGSRFSKTELKQYQYIQDATVIEHTVKRLSQLPLTGYVLAIGKQDTFASTLSFQDKHKAHFCNGGVERVHSVLNALNYLSQIADEDDWVLVHDAARPCVTFECLNTLVKNAIETNQSAILAIPVRDTLKQVNQEQQIEKTVSRELLWQAQTPQIAKIGILKKAIETALKNNLTITDEASALESIGESVQVVMGRSDNIKITYPDDLELARLILQSQN

Atome Classification :

(23 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

CTP_A_4(1I52)
ISPD_ECOLI
[Raw transfer]



CDM_A_3(1INI)
ISPD_ECOLI
[Raw transfer]



CDM_A_3(1INI)
ISPD_ECOLI
[Raw transfer]



CTP_A_5(4ZDQ)
ISPD_BURTA
[Raw transfer]



CTP_A_5(4ZDQ)
ISPD_BURTA
[Raw transfer]



CTP_A_3(5HS2)
ISPD_BACSU
[Raw transfer]



CDM_B_7(3Q80)
ISPD_MYCTU
[Raw transfer]



C5P_A_3(2XWM)
?
[Raw transfer]



CTP_D_16(4ZDQ)
ISPD_BURTA
[Raw transfer]



C5P_B_4(2XWM)
?
[Raw transfer]



PGO_A_3(3N9W)
ISPD_ECOLI
[Raw transfer]



PGR_B_5(3N9W)
ISPD_ECOLI
[Raw transfer]



ACY_B_8(1VPA)
ISPD_THEMA
[Raw transfer]



ACY_A_7(1VPA)
ISPD_THEMA
[Raw transfer]
55 Fugue 84.4741% -44 - C1 -1INI 7.8 ISPD_ECOLI
7 PsiBlast_PDB 84.0941% -44 - C1 -1INI 7.8 ISPD_ECOLI
56 Fugue 83.7241% -47 - C1 -1I52 - ISPD_ECOLI -
41 HHSearch 83.5741% -48 - C1 -1I52 - ISPD_ECOLI -
5 PsiBlast_PDB 82.6341% -49 - C1 -1I52 7.3 ISPD_ECOLI
6 PsiBlast_PDB 81.3041% -55 - C1 -1INJ - ISPD_ECOLI -
27 PsiBlast_CBE 81.2441% -46 - C1 -1H3M - ISPD_ECOLI -
3 PsiBlast_PDB 80.1541% -52 - C1 -1H3M - ISPD_ECOLI -
35 HHSearch 79.6239% -59 - C1 -4ZDQ - ISPD_BURTA -
9 PsiBlast_PDB 79.3641% -43 - C1 -1VGU - ISPD_ECOLI -
28 PsiBlast_CBE 78.7241% -42 - C1 -3N9W 4.1 ISPD_ECOLI
36 HHSearch 77.7539% -47 - C1 -4ZDQ 7.3 ISPD_BURTA
13 PsiBlast_PDB 77.1938% -36 - C1 -5HS2 8.4 ISPD_BACSU
47 HHSearch 76.1929%-130 - C1 -2PX7 - ISPD_THET8 -
45 HHSearch 76.1837% -29 - C1 -5DDT - ISPD_BACSU -
8 PsiBlast_PDB 75.4741% -48 - C- -1VGT - ISPD_ECOLI -
4 PsiBlast_PDB 74.9041% -55 - C1 -3N9W 4.1 ISPD_ECOLI
11 PsiBlast_PDB 74.7038% -25 - C1 -5DDT - ISPD_BACSU -
12 PsiBlast_PDB 74.4538% -36 - C1 -5DDV - ISPD_BACSU -
48 HHSearch 72.1429%-117 - C1 -2PX7 - ISPD_THET8 -
2 PsiBlast_PDB 68.5039% -4 - C1 -4ZDQ 7.3 ISPD_BURTA
21 PsiBlast_CBE 67.9239% -9 - C1 -4ZDQ 2.5 ISPD_BURTA
15 PsiBlast_PDB 59.1434% -11 - C1 -2XWM 5.5 ?