Binding Site Information :
Doc...
Information extracted from the bests complexes created by comparative docking.



Prediction Binding Site :


Binding Site Prediction
[Download fasta file] - [Download text file]

Binding Site Number :C2_S1
Best Complexes choosen after comparative docking [pKd > 3] : 5 (5 maxi)

Complexes [Theoretical pKd]FileVolume (A3)
(FPocket)
Hydrophobicity
Score(FPocket)
Contacts Ligand/Receptor [<4A] in Site C2_S1
Complex: PAI_A_5(1JCX) / Model_151(1JCX/A) = [6.5] Download738.4712.62MSQLKPQEVVRLGDIQMANHLPFVLFGGMNVLESKDLAFEIAETYIDICKRLDIPYVFKASFDKANRSSLHSFRGPGLEKGIEWLGDIKKHFNVPIITDVHEPYQAAPVAEVADIIQLPAFLSRQTDLVEAMAKTQAIINIKKAQFLAPHEMRHILHKCLEVGNDKLILCERGSAFGYNNLVVDMLGFDIMKEMNVPVFFDVTHALQTPGGRSDSAGGRRAQITTLARAGMATGLAGLFLESHPDPDKAKCDGPSALRLSQLEPFLAQLKELDTLVKGFKKLDTH
Complex: KD0_B_9(3E12) / Model_134(3E12/B) = [6.1] Download846.5711.54MSQLKPQEVVRLGDIQMANHLPFVLFGGMNVLESKDLAFEIAETYIDICKRLDIPYVFKASFDKANRSSLHSFRGPGLEKGIEWLGDIKKHFNVPIITDVHEPYQAAPVAEVADIIQLPAFLSRQTDLVEAMAKTQAIINIKKAQFLAPHEMRHILHKCLEVGNDKLILCERGSAFGYNNLVVDMLGFDIMKEMNVPVFFDVTHALQTPGGRSDSAGGRRAQITTLARAGMATGLAGLFLESHPDPDKAKCDGPSALRLSQLEPFLAQLKELDTLVKGFKKLDTH
Complex: 1NT_I_9(2NXG) / Model_114(2NXG/B) = [6.0] Download846.8813.85MSQLKPQEVVRLGDIQMANHLPFVLFGGMNVLESKDLAFEIAETYIDICKRLDIPYVFKASFDKANRSSLHSFRGPGLEKGIEWLGDIKKHFNVPIITDVHEPYQAAPVAEVADIIQLPAFLSRQTDLVEAMAKTQAIINIKKAQFLAPHEMRHILHKCLEVGNDKLILCERGSAFGYNNLVVDMLGFDIMKEMNVPVFFDVTHALQTPGGRSDSAGGRRAQITTLARAGMATGLAGLFLESHPDPDKAKCDGPSALRLSQLEPFLAQLKELDTLVKGFKKLDTH
Complex: H4P_A_5(1PCW) / Model_145(1PCW/A) = [5.7] Download994.6710.03MSQLKPQEVVRLGDIQMANHLPFVLFGGMNVLESKDLAFEIAETYIDICKRLDIPYVFKASFDKANRSSLHSFRGPGLEKGIEWLGDIKKHFNVPIITDVHEPYQAAPVAEVADIIQLPAFLSRQTDLVEAMAKTQAIINIKKAQFLAPHEMRHILHKCLEVGNDKLILCERGSAFGYNNLVVDMLGFDIMKEMNVPVFFDVTHALQTPGGRSDSAGGRRAQITTLARAGMATGLAGLFLESHPDPDKAKCDGPSALRLSQLEPFLAQLKELDTLVKGFKKLDTH
Complex: A5P_B_10(3UND) / Model_55(3UND/B) = [5.0] Download597.2913.16MSQLKPQEVVRLGDIQMANHLPFVLFGGMNVLESKDLAFEIAETYIDICKRLDIPYVFKASFDKANRSSLHSFRGPGLEKGIEWLGDIKKHFNVPIITDVHEPYQAAPVAEVADIIQLPAFLSRQTDLVEAMAKTQAIINIKKAQFLAPHEMRHILHKCLEVGNDKLILCERGSAFGYNNLVVDMLGFDIMKEMNVPVFFDVTHALQTPGGRSDSAGGRRAQITTLARAGMATGLAGLFLESHPDPDKAKCDGPSALRLSQLEPFLAQLKELDTLVKGFKKLDTH
Consensus
[pKd Mean = 5.86]
-804
(s=131)
12
(s=1)
MSQLKPQEVVRLGDIQMANHLPFVLFGGMNVLESKDLAFEIAETYIDICKRLDIPYVFKASFDKANRSSLHSFRGPGLEKGIEWLGDIKKHFNVPIITDVHEPYQAAPVAEVADIIQLPAFLSRQTDLVEAMAKTQAIINIKKAQFLAPHEMRHILHKCLEVGNDKLILCERGSAFGYNNLVVDMLGFDIMKEMNVPVFFDVTHALQTPGGRSDSAGGRRAQITTLARAGMATGLAGLFLESHPDPDKAKCDGPSALRLSQLEPFLAQLKELDTLVKGFKKLDTH



Statistical distribution of contacts between receptors and ligands in all complexes :
(only contacts < 8A are taken into consideration)


Res_NameRes_NumRes_AtNb_ContactsNb_ComplexesNb[At_Ligand]
PHE26O2121[O], 1[C],
GLY28O1121[O],
GLY28C1121[O],
MET29N1121[O],
MET29CA1121[O],
MET29C151210[O], 5[C],
MET29O281216[O], 12[C],
ASN30C551223[O], 2[N], 30[C],
ASN30OD1136122[N], 69[C], 3[P], 62[O],
ASN30O611225[O], 2[N], 34[C],
ASN30N291210[C], 19[O],
ASN30ND2141122[N], 69[C], 3[P], 67[O],
ASN30CG1261268[C], 2[N], 56[O],
ASN30CB811233[O], 2[N], 46[C],
ASN30CA571230[C], 2[N], 25[O],
VAL31CG1411223[C], 18[O],
VAL31CG23123[O],
VAL31N251211[C], 14[O],
VAL31CA141214[O],
VAL31CB121212[O],
LYS59NZ891238[O], 2[N], 43[C], 6[P],
LYS59O5123[O], 2[C],
LYS59CD551230[O], 2[N], 23[C],
LYS59C11128[O], 3[C],
LYS59CE71122[N], 35[C], 3[P], 31[O],
LYS59CA4122[C], 2[O],
LYS59CG351217[O], 17[C], 1[N],
LYS59N1121[O],
LYS59CB211213[O], 8[C],
ALA60N17125[C], 12[O],
ALA60CA21129[C], 12[O],
ALA60O12124[C], 8[O],
ALA60C241213[O], 11[C],
ALA60CB1121[O],
SER61CB711230[O], 39[C], 2[N],
SER61O5125[O],
SER61OG100127[P], 45[C], 2[N], 46[O],
SER61CA441220[O], 22[C], 2[N],
SER61N351216[C], 19[O],
SER61C8126[O], 2[C],
PHE62N4124[O],
ASP63CB1121[O],
ASP63N1121[O],
ASP63O611224[O], 1[P], 34[C], 2[N],
ASP63C271210[C], 17[O],
LYS64CB1131250[O], 9[P], 52[C], 2[N],
LYS64CA87121[P], 50[C], 2[N], 34[O],
LYS64CG1111248[O], 1[P], 60[C], 2[N],
LYS64CD1231254[O], 1[P], 66[C], 2[N],
LYS64NZ160122[N], 69[C], 7[P], 82[O],
LYS64CE1661211[P], 69[C], 2[N], 84[O],
LYS64N411221[O], 1[P], 19[C],
LYS64C721232[O], 1[P], 39[C],
LYS64O501223[C], 27[O],
ALA65O10128[O], 1[C], 1[P],
ALA65CB10122[C], 1[P], 7[O],
ALA65C36121[P], 17[C], 18[O],
ALA65N61121[P], 34[C], 26[O],
ALA65CA251215[O], 9[C], 1[P],
ASN66N921240[O], 47[C], 5[P],
ASN66CG1711291[O], 15[P], 63[C], 2[N],
ASN66CA1021247[O], 9[P], 46[C],
ASN66C1161261[O], 46[C], 9[P],
ASN66CB1381215[P], 54[C], 2[N], 67[O],
ASN66O1241269[O], 9[P], 46[C],
ASN66ND21721291[O], 2[N], 64[C], 15[P],
ASN66OD1169122[N], 62[C], 15[P], 90[O],
ARG67CD118128[P], 46[C], 64[O],
ARG67N1111244[C], 9[P], 58[O],
ARG67CB861247[O], 8[P], 31[C],
ARG67C881249[O], 31[C], 8[P],
ARG67CZ1051259[O], 37[C], 9[P],
ARG67NE1131265[O], 9[P], 39[C],
ARG67CG991255[O], 8[P], 36[C],
ARG67CA106128[P], 39[C], 59[O],
ARG67O67128[P], 18[C], 41[O],
SER68O34128[P], 26[O],
SER68N911251[O], 8[P], 32[C],
SER68C52128[C], 8[P], 36[O],
SER68CA661218[C], 8[P], 40[O],
SER68CB641239[O], 8[P], 17[C],
SER68OG841250[O], 8[P], 26[C],
SER69CA38128[P], 30[O],
SER69N521236[O], 8[C], 8[P],
SER69O351227[O], 8[P],
SER69C23128[P], 15[O],
SER69OG8128[O],
SER69CB33128[P], 25[O],
LEU70N8128[O],
HIS71C2122[O],
SER72O8128[O],
SER72CA231215[O], 8[P],
SER72CB51128[P], 5[C], 38[O],
SER72C8128[O],
SER72N8128[O],
SER72OG501236[O], 6[C], 8[P],
PHE73O42127[C], 8[P], 27[O],
PHE73C111211[O],
PHE73N8128[O],
ARG74O1121[O],
ARG74CA2122[O],
ILE97CD12121[C], 1[O],
ILE97O2121[C], 1[O],
ILE97CB1121[O],
ILE97CA1121[O],
ILE97C2121[C], 1[O],
ILE97CG12121[O], 1[C],
ILE97CG21121[O],
THR98C21129[C], 12[O],
THR98CA10128[O], 2[C],
THR98CB1121[O],
THR98O4122[C], 2[O],
THR98OG16121[C], 5[O],
THR98N2121[C], 1[O],
ASP99O11127[O], 4[C],
ASP99OD1791238[O], 5[P], 34[C], 2[N],
ASP99OD2118127[P], 47[C], 2[N], 62[O],
ASP99C18129[O], 9[C],
ASP99CB731234[O], 2[N], 30[C], 7[P],
ASP99CA461222[C], 2[N], 22[O],
ASP99N371219[C], 1[N], 17[O],
ASP99CG991251[O], 7[P], 39[C], 2[N],
VAL100C5123[O], 2[C],
VAL100N5122[O], 3[C],
VAL100O13122[C], 1[P], 10[O],
VAL100CA3122[O], 1[C],
HIS101CA2122[O],
HIS101NE2421217[O], 1[P], 24[C],
HIS101CE1431218[O], 1[P], 22[C], 2[N],
HIS101CD220128[C], 1[P], 11[O],
HIS101CB4122[O], 1[P], 1[C],
HIS101ND124121[P], 11[C], 2[N], 10[O],
HIS101CG10124[C], 1[P], 5[O],
HIS101N3123[O],
GLN117CB481225[O], 1[P], 20[C], 2[N],
GLN117C19125[C], 14[O],
GLN117NE2761238[O], 2[N], 30[C], 6[P],
GLN117CG71126[P], 28[C], 2[N], 35[O],
GLN117O16125[C], 11[O],
GLN117CA11123[C], 8[O],
GLN117CD84126[P], 31[C], 2[N], 45[O],
GLN117OE1991254[O], 2[N], 36[C], 7[P],
GLN117N2122[O],
LEU118CD11121[O],
LEU118C651235[O], 7[P], 21[C], 2[N],
LEU118CB7127[O],
LEU118CG7127[O],
LEU118N19121[P], 5[C], 13[O],
LEU118O661235[O], 2[N], 22[C], 7[P],
LEU118CA221213[O], 3[C], 6[P],
PRO119CG92127[P], 34[C], 2[N], 49[O],
PRO119N79122[N], 27[C], 7[P], 43[O],
PRO119O49122[N], 11[C], 7[P], 29[O],
PRO119CD71122[N], 25[C], 7[P], 37[O],
PRO119CB103127[P], 42[C], 2[N], 52[O],
PRO119CA961252[O], 7[P], 35[C], 2[N],
PRO119C78122[N], 26[C], 7[P], 43[O],
ALA120N96127[P], 36[C], 2[N], 51[O],
ALA120CB85122[N], 31[C], 7[P], 45[O],
ALA120CA691240[O], 7[P], 20[C], 2[N],
ALA120C47129[C], 7[P], 31[O],
ALA120O28127[P], 21[O],
PHE121CD2901245[O], 7[P], 38[C],
PHE121CD146126[C], 7[P], 33[O],
PHE121C14128[O], 6[P],
PHE121CE21201251[C], 8[P], 61[O],
PHE121CZ1021258[O], 7[P], 37[C],
PHE121CB421230[O], 7[P], 5[C],
PHE121CA351226[O], 2[C], 7[P],
PHE121N601236[O], 7[P], 16[C], 1[N],
PHE121CE1591237[O], 7[P], 15[C],
PHE121O4123[O], 1[P],
PHE121CG521232[O], 13[C], 7[P],
LEU122CD1151211[O], 1[P], 3[C],
LEU122N201213[O], 7[P],
LEU122CB111210[O], 1[P],
LEU122CG151211[O], 1[P], 3[C],
LEU122CD24121[P], 3[O],
LEU122C4124[O],
LEU122CA9121[P], 8[O],
SER123OG1121[O],
SER123N7127[O],
ASN140O2122[O],
ASN140OD17123[C], 4[O],
ASN140CB2122[O],
ASN140ND23123[O],
ASN140CG2122[O],
ILE141O6126[O],
ILE141C131213[O],
LYS142O33126[P], 2[C], 25[O],
LYS142NZ124127[P], 47[C], 2[N], 68[O],
LYS142CE951252[O], 6[P], 35[C], 2[N],
LYS142CD851246[O], 6[P], 31[C], 2[N],
LYS142CB771241[O], 6[P], 28[C], 2[N],
LYS142N29126[P], 3[C], 20[O],
LYS142C32122[C], 6[P], 24[O],
LYS142CA461231[O], 1[N], 8[C], 6[P],
LYS142CG91122[N], 34[C], 7[P], 48[O],
LYS143O241218[O], 6[P],
LYS143CA6126[O],
LYS143N181212[O], 6[P],
LYS143C18126[P], 12[O],
ALA144C6126[O],
ALA144N121212[O],
ALA144CA131212[O], 1[P],
GLN145NE287126[P], 37[C], 2[N], 42[O],
GLN145CD461234[O], 6[P], 6[C],
GLN145N6126[O],
GLN145CG25126[P], 19[O],
GLN145OE137126[P], 4[C], 27[O],
CYS170CA1121[O],
CYS170CB8128[O],
CYS170SG30126[P], 3[C], 21[O],
CYS170O6126[O],
CYS170C6126[O],
GLU171O6126[O],
GLU171C6126[O],
ARG172CG531237[O], 6[P], 8[C], 2[N],
ARG172CB521236[O], 2[N], 8[C], 6[P],
ARG172O221216[O], 6[P],
ARG172C12122[P], 10[O],
ARG172N6126[O],
ARG172CA21126[P], 15[O],
ARG172CZ1281262[O], 2[N], 58[C], 6[P],
ARG172CD621239[O], 2[N], 15[C], 6[P],
ARG172NE114126[P], 47[C], 2[N], 59[O],
GLY173N6126[O],
LEU181CD1111211[O],
LEU181CG1121[O],
ASP201C3122[O], 1[C],
ASP201O3121[C], 2[O],
ASP201CG66122[N], 22[C], 6[P], 36[O],
ASP201N1121[O],
ASP201CA11129[O], 2[C],
ASP201CB411211[C], 6[P], 24[O],
ASP201OD158122[N], 20[C], 6[P], 30[O],
ASP201OD299122[N], 36[C], 6[P], 55[O],
VAL202O2122[O],
VAL202CA1121[O],
VAL202N1121[O],
VAL202C3121[C], 2[O],
THR203CA5123[O], 2[C],
THR203O131210[O], 3[C],
THR203OG120127[C], 13[O],
THR203N3121[C], 2[O],
THR203CG2201212[O], 8[C],
THR203C16124[C], 12[O],
THR203CB15126[C], 9[O],
HIS204ND11371271[O], 7[P], 57[C], 2[N],
HIS204CG149122[N], 68[C], 6[P], 73[O],
HIS204C431228[O], 10[C], 5[P],
HIS204O431210[C], 5[P], 28[O],
HIS204CE1148127[P], 65[C], 2[N], 74[O],
HIS204CD2158122[N], 68[C], 6[P], 82[O],
HIS204NE2160122[N], 69[C], 7[P], 82[O],
HIS204CB131122[N], 56[C], 6[P], 67[O],
HIS204CA971248[O], 2[N], 41[C], 6[P],
HIS204N64121[N], 17[C], 2[P], 44[O],
ALA205N14121[C], 13[O],
ALA205CA1121[O],
GLN207CD1381213[P], 52[C], 2[N], 71[O],
GLN207O7127[O],
GLN207NE2149122[N], 55[C], 14[P], 78[O],
GLN207CG791239[O], 39[C], 1[P],
GLN207OE11491276[O], 13[P], 58[C], 2[N],
GLN207N4124[O],
GLN207CB521225[O], 27[C],
GLN207CA141210[O], 4[C],
GLN207C9121[C], 8[O],
THR208C23127[C], 16[O],
THR208O43129[C], 7[P], 27[O],
THR208CA3123[O],
THR208N5121[C], 4[O],
PRO209N26121[P], 8[C], 17[O],
PRO209CD5124[O], 1[C],
PRO209O8128[O],
PRO209C40129[C], 7[P], 24[O],
PRO209CB28122[P], 10[C], 16[O],
PRO209CA531217[C], 7[P], 29[O],
PRO209CG201213[O], 1[P], 6[C],
GLY210C24121[C], 6[P], 17[O],
GLY210O12122[P], 10[O],
GLY210CA39127[C], 6[P], 26[O],
GLY210N501230[O], 6[P], 14[C],
GLY211CA3123[O],
GLY211N10123[P], 7[O],
ARG212CZ1121[O],
ARG212CD3123[O],
ARG212NE1121[O],
ARG212N6126[O],
ARG212CA2122[O],
ARG212CG3123[O],
ARG212CB6126[O],
SER213O13124[P], 9[O],
SER213CB1121[O],
SER213CA1121[O],
SER213N3123[O],
SER213C131210[O], 3[P],
SER213OG3121[P], 2[O],
ASP214O241216[O], 4[C], 4[P],
ASP214CG5125[O],
ASP214C211216[O], 4[P], 1[C],
ASP214CA161212[O], 4[P],
ASP214OD25125[O],
ASP214N161212[O], 4[P],
ASP214CB10129[O], 1[P],
SER215C30128[C], 4[P], 18[O],
SER215OG231216[O], 3[C], 4[P],
SER215N241216[O], 4[P], 4[C],
SER215O26124[P], 5[C], 17[O],
SER215CB28127[C], 4[P], 17[O],
SER215CA29124[P], 8[C], 17[O],
ALA216C32124[P], 8[C], 20[O],
ALA216CB521230[O], 4[P], 18[C],
ALA216O33128[C], 4[P], 21[O],
ALA216N401224[O], 4[P], 12[C],
ALA216CA391223[O], 4[P], 12[C],
GLY217C5125[O],
GLY217N291218[O], 5[P], 6[C],
GLY217CA12123[P], 9[O],
GLY217O25127[C], 4[P], 14[O],
GLY218N1121[O],
GLY218CA1121[O],
ARG219CZ1121[O],
PHE239CZ871245[O], 6[P], 34[C], 2[N],
PHE239CE1811240[O], 6[P], 33[C], 2[N],
PHE239CB13129[O], 4[C],
PHE239O3121[C], 2[O],
PHE239CE2621231[O], 2[N], 25[C], 4[P],
PHE239CG441215[C], 29[O],
PHE239CD2491219[C], 2[N], 28[O],
PHE239C5122[C], 3[O],
PHE239CA3122[O], 1[C],
PHE239CD1521220[C], 2[N], 30[O],
LEU240C7124[O], 3[C],
LEU240O9125[O], 4[C],
LEU240N5122[C], 3[O],
LEU240CA5123[O], 2[C],
GLU241N13124[C], 9[O],
GLU241CB341223[O], 11[C],
GLU241CG601230[O], 28[C], 2[N],
GLU241CA13124[C], 9[O],
GLU241C1121[O],
GLU241OE1100122[N], 53[C], 45[O],
GLU241CD93121[P], 48[C], 2[N], 42[O],
GLU241OE21181256[O], 2[N], 54[C], 6[P],
LYS250O301221[O], 3[C], 6[P],
LYS250C9121[C], 8[O],
CYS251N19124[C], 15[O],
CYS251O401218[C], 22[O],
CYS251SG1251264[O], 8[P], 51[C], 2[N],
CYS251CA811242[O], 8[P], 31[C],
CYS251CB92128[P], 38[C], 46[O],
CYS251C821242[O], 8[P], 32[C],
ASP252CB1041251[O], 8[P], 45[C],
ASP252CG1531285[O], 8[P], 58[C], 2[N],
ASP252N1011256[O], 37[C], 8[P],
ASP252CA921247[O], 8[P], 37[C],
ASP252OD2158122[N], 61[C], 12[P], 83[O],
ASP252OD1149122[N], 57[C], 10[P], 80[O],
ASP252C341221[O], 13[C],
ASP252O15123[C], 12[O],
GLY253N161212[O], 4[C],
GLY253CA7125[O], 2[C],
GLY253O6122[C], 4[O],
GLY253C6124[O], 2[C],
PRO254CD22127[C], 15[O],
PRO254CA7123[C], 4[O],
PRO254O2121[O], 1[C],
PRO254CB12126[O], 6[C],
PRO254CG25121[P], 9[C], 15[O],
PRO254C5122[C], 3[O],
PRO254N8124[C], 4[O],
SER255CA2122[O],
SER255CB6124[O], 2[C],
SER255C1121[O],
SER255N6124[O], 2[C],
SER255O3121[C], 2[O],
SER255OG271212[C], 15[O],
ALA256N1121[O],
Total = 380



Download csv file of statistical distribution of contacts