@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VQI5: (2017-11-27 )
MSQLKPQEVVRLGDIQMANHLPFVLFGGMNVLESKDLAFEIAETYIDICKRLDIPYVFKASFDKANRSSLHSFRGPGLEKGIEWLGDIKKHFNVPIITDVHEPYQAAPVAEVADIIQLPAFLSRQTDLVEAMAKTQAIINIKKAQFLAPHEMRHILHKCLEVGNDKLILCERGSAFGYNNLVVDMLGFDIMKEMNVPVFFDVTHALQTPGGRSDSAGGRRAQITTLARAGMATGLAGLFLESHPDPDKAKCDGPSALRLSQLEPFLAQLKELDTLVKGFKKLDTH

Atome Classification :

(68 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

H4P_A_5(1PCW)
KDSA_AQUAE
[Raw transfer]




PAI_A_5(1JCX)
KDSA_AQUAE
[Raw transfer]




PAI_B_6(1JCX)
KDSA_AQUAE
[Raw transfer]




KD0_B_9(3E12)
KDSA_AQUAE
[Raw transfer]




KD0_A_8(3E12)
KDSA_AQUAE
[Raw transfer]




H4P_B_6(1PCW)
KDSA_AQUAE
[Raw transfer]




DO8_E_5(1X6U)
KDSA_ECOLI
[Raw transfer]




2PG_B_8(1PE1)
KDSA_AQUAE
[Raw transfer]




A5P_B_10(3UND)
?
[Raw transfer]




A5P_A_5(3TMQ)
?
[Raw transfer]




A5P_A_5(3UND)
?
[Raw transfer]




A5P_C_15(3UND)
?
[Raw transfer]




A5P_D_20(3UND)
?
[Raw transfer]




RP5_B_7(2NX1)
KDSA_AQUAE
[Raw transfer]




PEP_A_9(2NWR)
KDSA_AQUAE
[Raw transfer]




2PG_A_7(1PE1)
KDSA_AQUAE
[Raw transfer]




PEP_B_7(1FWT)
KDSA_AQUAE
[Raw transfer]




R5P_A_3(1JCY)
KDSA_AQUAE
[Raw transfer]




A5P_K_11(1FXQ)
KDSA_AQUAE
[Raw transfer]




PEP_A_7(2A21)
KDSA_AQUAE
[Raw transfer]




PEZ_A_7(1PCK)
KDSA_AQUAE
[Raw transfer]




PEZ_B_8(1PCK)
KDSA_AQUAE
[Raw transfer]




A5P_B_11(2NWS)
KDSA_AQUAE
[Raw transfer]




1NT_I_9(2NXG)
KDSA_AQUAE
[Raw transfer]




GOL_B_6(3FYP)
KDSA_NEIMB
[Raw transfer]




A5P_K_11(2EF9)
KDSA_AQUAE
[Raw transfer]




PEP_B_8(3E0I)
KDSA_AQUAE
[Raw transfer]




A5P_I_9(1FXQ)
KDSA_AQUAE
[Raw transfer]




A5P_A_7(2A2I)
KDSA_AQUAE
[Raw transfer]




PEP_B_11(2NWR)
KDSA_AQUAE
[Raw transfer]




A5P_G_7(2NXG)
KDSA_AQUAE
[Raw transfer]




PAI_C_2(1G7V)
KDSA_ECOLI
[Raw transfer]




PEP_A_7(3E0I)
KDSA_AQUAE
[Raw transfer]




PEP_B_8(2A21)
KDSA_AQUAE
[Raw transfer]




PEP_B_11(2NWR)
KDSA_AQUAE
[Raw transfer]




PEP_B_7(1FWW)
KDSA_AQUAE
[Raw transfer]




A5P_A_8(1FWW)
KDSA_AQUAE
[Raw transfer]




A5P_A_9(2NWS)
KDSA_AQUAE
[Raw transfer]




PAI_C_2(1G7V)
KDSA_ECOLI
[Raw transfer]




PEP_B_5(4Z1D)
KDSA_HELPY
[Raw transfer]




A5P_G_7(2NXG)
KDSA_AQUAE
[Raw transfer]




PEP_E_5(1Q3N)
KDSA_ECOLI
[Raw transfer]




A5P_B_8(2A2I)
KDSA_AQUAE
[Raw transfer]




GOL_B_6(3STF)
KDSA_NEIMB
[Raw transfer]




RP5_A_5(2NX1)
KDSA_AQUAE
[Raw transfer]




PEP_B_8(1JCY)
KDSA_AQUAE
[Raw transfer]




PEP_D_9(3FYP)
KDSA_NEIMB
[Raw transfer]




A5P_A_8(1FY6)
KDSA_AQUAE
[Raw transfer]




E4P_A_8(1FWT)
KDSA_AQUAE
[Raw transfer]




A5P_I_9(2EF9)
KDSA_AQUAE
[Raw transfer]




PEP_B_2(1G7U)
KDSA_ECOLI
[Raw transfer]




A5P_C_14(3TMQ)
?
[Raw transfer]




PEP_D_8(3FYO)
KDSA_NEIMB
[Raw transfer]




PEP_B_2(1G7U)
KDSA_ECOLI
[Raw transfer]




FPE_E_5(1PHQ)
KDSA_ECOLI
[Raw transfer]




ROB_E_5(1PHW)
KDSA_ECOLI
[Raw transfer]




EDO_B_12(3TMQ)
?
[Raw transfer]




FPE_E_5(1PL9)
KDSA_ECOLI
[Raw transfer]




9 PsiBlast_PDB 89.6066% -88 - C2 -1X6U 4.0 KDSA_ECOLI
1 PsiBlast_PDB 89.4673%-141 - C2 -4LU0 - KDSA_PSEAE -
64 PsiBlast_CBE 87.6961%-105 - C2 -3FYO 3.6 KDSA_NEIMB
163 Fugue 87.5368% -93 - C2 -1D9E - KDSA_ECOLI -
3 PsiBlast_PDB 87.2666% -88 - C2 -1GG0 - KDSA_ECOLI -
7 PsiBlast_PDB 87.2566% -88 - C2 -1PL9 2.4 KDSA_ECOLI
184 HHSearch 87.0762% -91 - C2 -3STG - KDSA_NEIMB -
6 PsiBlast_PDB 86.8866% -86 - C2 -1PHW 2.2 KDSA_ECOLI
5 PsiBlast_PDB 86.5366% -83 - C2 -1PHQ 2.6 KDSA_ECOLI
18 PsiBlast_PDB 86.5162%-118 - C2 -3STE - KDSA_NEIMB -
11 PsiBlast_PDB 86.4566% -87 - C2 -1G7U 3.4 KDSA_ECOLI
72 PsiBlast_CBE 86.4361%-113 - C2 -3FYP 2.1 KDSA_NEIMB
8 PsiBlast_PDB 86.3266% -88 - C2 -1Q3N 1.9 KDSA_ECOLI
174 HHSearch 86.2767% -86 - C2 -1G7U 3.4 KDSA_ECOLI
2 PsiBlast_PDB 86.2466% -94 - C2 -1D9E - KDSA_ECOLI -
70 PsiBlast_CBE 86.2361%-113 - C2 -3FYP 3.4 KDSA_NEIMB
16 PsiBlast_PDB 85.8862%-119 - C2 -4JTK - KDSA_NEIMB -
41 PsiBlast_CBE 85.8562%-103 - C2 -4JTF - KDSA_NEIMB -
19 PsiBlast_PDB 85.7462%-109 - C2 -3QPZ - KDSA_NEIMB -
35 PsiBlast_CBE 85.1662%-110 - C2 -3QPZ - KDSA_NEIMB -
79 PsiBlast_CBE 83.6062%-108 - C2 -3STF 2.3 KDSA_NEIMB
59 PsiBlast_CBE 83.0558% -78 - C2 -3TMQ 4.9 ?
55 PsiBlast_CBE 82.6658% -78 - C2 -3UND 5.0 ?
4 PsiBlast_PDB 82.6466% -89 - C2 -1G7V 3.0 KDSA_ECOLI
54 PsiBlast_CBE 82.4458% -79 - C2 -3UND 5.1 ?
56 PsiBlast_CBE 82.2658% -75 - C2 -3UND 5.0 ?
57 PsiBlast_CBE 82.2058% -75 - C2 -3TMQ 4.7 ?
58 PsiBlast_CBE 82.0858% -99 - C2 -3TMQ 2.5 ?
53 PsiBlast_CBE 82.0058% -77 - C2 -3UND 5.1 ?
164 Fugue 70.7867% 7 - C2 -1G7V 3.0 KDSA_ECOLI
187 HHSearch 68.9446% -64 * C2 *4Z1D 3.3 KDSA_HELPY
179 HHSearch 67.5647% 1 - C2 -2NXG 3.6 KDSA_AQUAE
85 PsiBlast_CBE 67.5449% -8 - C2 -2EF9 3.2 KDSA_AQUAE
84 PsiBlast_CBE 67.3849% -4 - C2 -2EF9 3.7 KDSA_AQUAE
115 PsiBlast_CBE 66.8049% -2 - C2 -2NXG 3.6 KDSA_AQUAE
153 PsiBlast_CBE 66.6447% -7 - C2 -1FY6 2.9 KDSA_AQUAE
155 PsiBlast_CBE 66.5547% -5 - C2 -1FXQ 3.4 KDSA_AQUAE
162 PsiBlast_CBE 66.5347% -5 - C2 -1FWT 3.3 KDSA_AQUAE
145 PsiBlast_CBE 66.3747% -8 - C2 -1PCW 5.7 KDSA_AQUAE
133 PsiBlast_CBE 66.2448% -6 - C2 -2NWR 4.4 KDSA_AQUAE
140 PsiBlast_CBE 66.2147% -9 - C2 -2A21 4.2 KDSA_AQUAE
134 PsiBlast_CBE 66.1847% -6 - C2 -3E12 6.1 KDSA_AQUAE
148 PsiBlast_CBE 66.1047% -9 - C2 -1JCY 3.9 KDSA_AQUAE
129 PsiBlast_CBE 65.9748% -6 - C2 -2NX1 3.8 KDSA_AQUAE
143 PsiBlast_CBE 65.9347% -7 - C2 -1PE1 4.0 KDSA_AQUAE
114 PsiBlast_CBE 65.9349% -6 - C2 -2NXG 6.0 KDSA_AQUAE
160 PsiBlast_CBE 65.8247% -6 - C2 -1FWW 3.1 KDSA_AQUAE
131 PsiBlast_CBE 65.8248% -1 - C2 -2NWS 4.3 KDSA_AQUAE
141 PsiBlast_CBE 65.6047% -6 - C2 -2A21 4.3 KDSA_AQUAE
135 PsiBlast_CBE 65.6047% -5 - C2 -3E12 5.6 KDSA_AQUAE
144 PsiBlast_CBE 65.5147% -9 - C2 -1PCW 5.2 KDSA_AQUAE
159 PsiBlast_CBE 65.3547% -9 - C2 -1FWW 4.3 KDSA_AQUAE
147 PsiBlast_CBE 65.3547% -8 - C2 -1PCK 4.4 KDSA_AQUAE
154 PsiBlast_CBE 65.3247% -6 - C2 -1FXQ 3.9 KDSA_AQUAE
146 PsiBlast_CBE 65.2647% -8 - C2 -1PCK 4.3 KDSA_AQUAE
130 PsiBlast_CBE 65.0748% 1 - C2 -2NWS 4.0 KDSA_AQUAE
139 PsiBlast_CBE 64.9747% -5 - C2 -2A2I 3.4 KDSA_AQUAE
137 PsiBlast_CBE 64.9347% -4 - C2 -3E0I 4.2 KDSA_AQUAE
128 PsiBlast_CBE 64.9148% -0 - C2 -2NX1 4.2 KDSA_AQUAE
150 PsiBlast_CBE 64.8747% -9 - C2 -1JCX 5.8 KDSA_AQUAE
136 PsiBlast_CBE 64.8547% -8 - C2 -3E0I 4.5 KDSA_AQUAE
138 PsiBlast_CBE 64.8347% -10 - C2 -2A2I 2.6 KDSA_AQUAE
132 PsiBlast_CBE 64.7648% -5 - C2 -2NWR 4.3 KDSA_AQUAE
149 PsiBlast_CBE 64.7547% -4 - C2 -1JCY 3.4 KDSA_AQUAE
182 HHSearch 64.6246% -2 - C2 -2NWR 4.3 KDSA_AQUAE
142 PsiBlast_CBE 64.5847% -5 - C2 -1PE1 4.0 KDSA_AQUAE
161 PsiBlast_CBE 64.3447% -7 - C2 -1FWT 4.2 KDSA_AQUAE
151 PsiBlast_CBE 64.1747% -9 - C2 -1JCX 6.5 KDSA_AQUAE