@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VQK3: (2017-11-27 )
MISVGIVGGTGYTGVELLRILLRHPKAQVRVLTSRTEAGKPVADMFPNLRGHTDLQFSDLNIDALKECDVVFFATPHGVAMQHAKDLIAAGTKVIDLAADFRLQNLEQFEKWYGMEHACPDVLKDSVYGLTELNREKIKQAQVIGNPGCYPTTVQLGLAPLLKSAQALIETKNIIIDAKSGVSGAGRKASLGMIYSENADNFKAYGVAGHRHHPEIVEALENIAGKKDVFEGLLFVPHLVPMIRGMLSTIYVDLTEAGKQTDLQALYENFYANEKFVDVMPANSSPETRSVRGANELRIALYKPQPNKLIILAAQDNLVKGASGQAVQNMNLMFGFNEDEGLQGIGLLP

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NAP_A_4(5EIO)
LYSY_THET2
[Raw transfer]



NAP_A_4(5EIN)
LYSY_THET2
[Raw transfer]



FMT_A_9(5EIN)
LYSY_THET2
[Raw transfer]



FMT_A_9(5EIN)
LYSY_THET2
[Raw transfer]
2 PsiBlast_PDB 92.0744% -95 - C1 -2Q49 - ARGC_ARATH -
1 PsiBlast_PDB 91.4844% -99 - C1 -1XYG - ARGC_ARATH -
3 PsiBlast_PDB 90.4345% -83 - C1 -1VKN - ARGC_THEMA -
39 HHSearch 85.6745% -73 - C1 -2Q49 - ARGC_ARATH -
6 PsiBlast_PDB 83.4635% -85 - C1 -5EIO 11.2 LYSY_THET2
37 HHSearch 83.1737% -77 - C1 -5EIN 2.8 LYSY_THET2
9 PsiBlast_PDB 83.0135% -85 - C1 -5EIN 11.5 LYSY_THET2
21 PsiBlast_CBE 82.4735% -87 - C1 -5EIO - LYSY_THET2 -
36 HHSearch 81.9537% -77 - C1 -5EIN - LYSY_THET2 -
7 PsiBlast_PDB 81.8835% -82 - C1 -2OZP - ? -
22 PsiBlast_CBE 81.5935% -83 - C1 -5EIN - LYSY_THET2 -
38 HHSearch 74.6939% -27 - C1 -2G17 - ARGC_SALTY -
32 HHSearch 73.1949% 3 - C1 -1VKN - ARGC_THEMA -
26 PsiBlast_CBE 71.6636% -6 - C1 -2I3A - ARGC_MYCTU -
12 PsiBlast_PDB 71.4536% -9 - C- -2NQT - ARGC_MYCTU -
25 PsiBlast_CBE 70.7036% -5 - C1 -2I3A - ARGC_MYCTU -
11 PsiBlast_PDB 70.4736% -7 - C1 -2I3G - ARGC_MYCTU -
10 PsiBlast_PDB 70.3636% -7 - C1 -2I3A - ARGC_MYCTU -
24 PsiBlast_CBE 70.2936% -7 - C1 -2I3A - ARGC_MYCTU -
4 PsiBlast_PDB 70.0041% 11 - C1 -2CVO - ARGC_ORYSJ -