@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VQK8: (2017-11-27 )
MAQFAVIGLGSFGATVAQELTRLNHDVIGIDTVKKNVENLADVLTHAVIADATDEHVLDELNIQNCDAVVVAIGEDIEASILCVLNLKNLGIDKIWVKAKTKAHHTILSHLNINKIIHPEEDMGVRVAQALNYPMVSRYMSLDDEHYIVKIDIPEKLNGINLYGIMQQAPQVKTLLVKRQQQILFETEETFTLQTHDILILEGHLQQLKKLSNCFI

Atome Classification :

(26 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_M_13(2HMU)
KTRA_BACSU
[Raw transfer]




ATP_M_13(2HMW)
KTRA_BACSU
[Raw transfer]




ATP_B_4(4J90)
KTRA_BACSU
[Raw transfer]




ATP_A_3(4J90)
KTRA_BACSU
[Raw transfer]




ATP_M_13(2HMU)
KTRA_BACSU
[Raw transfer]




NAI_I_9(2HMS)
KTRA_BACSU
[Raw transfer]




ADP_C_7(4J91)
KTRA_BACSU
[Raw transfer]




ADP_D_8(4J91)
KTRA_BACSU
[Raw transfer]




NAI_I_9(2HMT)
KTRA_BACSU
[Raw transfer]




NAI_K_11(2HMS)
KTRA_BACSU
[Raw transfer]




NAI_L_12(2HMS)
KTRA_BACSU
[Raw transfer]




ADP_B_6(4J91)
KTRA_BACSU
[Raw transfer]




NAI_C_3(1LSU)
KTRA_BACSU
[Raw transfer]




NAI_C_3(1LSU)
KTRA_BACSU
[Raw transfer]




NAI_D_4(1LSU)
KTRA_BACSU
[Raw transfer]




28 PsiBlast_CBE 88.4040%-140 - C3 -4J7C - KTRA_BACSU -
30 PsiBlast_CBE 88.2140%-139 - C3 -4J7C - KTRA_BACSU -
26 PsiBlast_CBE 88.1840%-141 - C3 -4J7C - KTRA_BACSU -
25 PsiBlast_CBE 88.0240%-138 - C3 -4J7C - KTRA_BACSU -
3 PsiBlast_PDB 87.9740%-142 - C3 -4J7C - KTRA_BACSU -
31 PsiBlast_CBE 87.9240%-141 - C3 -4J7C - KTRA_BACSU -
55 HHSearch 87.8539%-137 - C3 -4J7C - KTRA_BACSU -
27 PsiBlast_CBE 87.2640%-138 - C3 -4J7C - KTRA_BACSU -
29 PsiBlast_CBE 87.0940%-139 - C3 -4J7C - KTRA_BACSU -
24 PsiBlast_CBE 86.7440%-140 - C3 -4J90 6.8 KTRA_BACSU
1 PsiBlast_PDB 86.5640%-137 - C3 -4J90 6.4 KTRA_BACSU
23 PsiBlast_CBE 86.4240%-144 * C3 *4J91 5.7 KTRA_BACSU
22 PsiBlast_CBE 85.7340%-146 - C3 -4J91 5.6 KTRA_BACSU
21 PsiBlast_CBE 83.3940%-151 - C3 -4J91 5.4 KTRA_BACSU
54 HHSearch 82.6239%-150 - C3 -4J91 - KTRA_BACSU -
2 PsiBlast_PDB 81.6040%-152 - C3 -4J91 - KTRA_BACSU -
4 PsiBlast_PDB 76.5148%-195 - C3 -2HMS 6.4 KTRA_BACSU
8 PsiBlast_PDB 75.8848%-202 - C3 -2HMW Error KTRA_BACSU
36 PsiBlast_CBE 75.5448%-191 - C3 -2HMS 6.2 KTRA_BACSU
34 PsiBlast_CBE 75.4748%-198 - C3 -2HMU 5.5 KTRA_BACSU
9 PsiBlast_PDB 75.4050%-188 - C3 -1LSU 5.6 KTRA_BACSU
45 Fugue 75.1348%-185 - C3 -1LSU 5.6 KTRA_BACSU
37 PsiBlast_CBE 74.9348%-193 - C3 -2HMS 6.7 KTRA_BACSU
5 PsiBlast_PDB 74.5148%-193 - C3 -2HMT 5.5 KTRA_BACSU
39 PsiBlast_CBE 74.1050%-188 - C3 -1LSU 4.4 KTRA_BACSU
6 PsiBlast_PDB 73.9448%-195 - C3 -2HMU Error KTRA_BACSU