@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VR18: (2017-11-30 )
MAEIDMNTMDTFHQMDKSHQGYITEFNDKSEFEQRINTAWRRAEPEAVEELLQAAAVSDDLDHKIYDLAFNLAHNLRERKTSSGKAGIVQGLLQEFSLSSQEGVALMCLAEALLRIPDTATRDLLIRDKINQGNWKEHVGQSSLMFVNAAAWGLMLTGKLMETPKQTSLSSVLTGLLARSGRGIIRKAVDVAMRMMGEQFVTGETIEEAVDHAKVLEDKGFRYSYDMLGEAALTDHDAERYFNDYTQAIHAIGKASNGKGVYDGPGISIKLSALHPRYQRAQIERVHKELYGKVFELARLAKQYNIGLNIDAEESERLEISLELLERLCFEPELANWKGIGFVIQAYQKRCFFVVDYIIDLAKRSQKRLMIRLVKGAYWDSEIKKAQIEGMDDYPVFTRKVHTDLSYIACAKKLLAAPEFIYPQFATHNAQTLATIYHLADPSKYYAGQYEFQCLHGMGEPLYEQVVGPRQQNKLGVPCRIYAPVGNHETLLAYLVRRLLENGANTSFVNRIADKTLKVEDLIQSPIYDIRNAAKLEGSVGLKHPSIPLPLDMYGTLRKNSKGYDLANDTPLAALDSTAQELRNRIWQSHPLLANTDSLEQGHSVAITNPAQNDEIVGYVQEADLKHVEIALTAAEQTQSEWSNTPKDQCAQYLKRAADLMESRIQELMVLLCRESGKTYANAIAEVREAVDFLRYYATQVENLPANTVIQPLGTVLCISPWNFPLAIFSGQIAAALVSGNCVIAKPAEQTPLIAAQAVQILWEAGIPHGAVQLLPGRGETVGAQLSQDSRIDGIMFTGSTEVAKILQKTVAKRLSENGQSIPLIAETGGQNAMIVDSSALTEQVVLDVVSSAFDSAGQRCSALRILCVQEDSAATVIKMLKGAMQQLIVGNPAILKTDIGPVIDDEAKQTIDQHIQKMKSKGYPVHQLMFGATSQTELDKGTFVVPTAIELPNLDDLQREVFGPVLHIITYKYGELEQLISRINAKGYGLTMGLHTRIDETIQTVIQHAEVGNLYINRNIVGAVVGVQPFGGEGLSGTGPKAGGPLYMYRLMQHCSNKVLATPFAVKNEQTIFEGFNREVYQSLQNWAKQHLPQANREIEPFGVGKFYELQGPTGESNQYIILPRHRVLSIADTEQDQLHQLLAIFAVGSQAAVMQNSPLLAKHKQTLPKDVLDAITTIKNITTDDFDAVLHHGNRKEIFSLQQEIASRSGAIVGITHVEPNESIPLERLVIERAISVNTAAAGGNASLMTMSE

Atome Classification :

(41 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NAD_A_3(5KF7)
?
[Raw transfer]



NAD_B_12(2EIT)
?
[Raw transfer]



NAD_A_10(2EIT)
?
[Raw transfer]



NAD_A_5(2J5N)
?
[Raw transfer]



NAP_B_10(2EHQ)
?
[Raw transfer]



NAD_A_3(2BHP)
?
[Raw transfer]



NAP_A_9(2EHQ)
?
[Raw transfer]



NAD_A_10(2EHU)
?
[Raw transfer]



NAD_B_15(2BHP)
?
[Raw transfer]



NAD_B_10(2BJK)
?
[Raw transfer]



NAD_A_3(2BJK)
?
[Raw transfer]



NAD_B_13(2J5N)
?
[Raw transfer]



NAP_A_9(2EHQ)
?
[Raw transfer]



NAD_A_10(2EII)
?
[Raw transfer]



NAD_B_12(2EHU)
?
[Raw transfer]



NAD_B_6(5AC0)
AL1A1_SHEEP
[Raw transfer]



NAI_A_2(4WB9)
AL1A1_HUMAN
[Raw transfer]



NAD_B_12(2EII)
?
[Raw transfer]



NAI_A_9(4X4L)
AL1A1_HUMAN
[Raw transfer]



TXE_A_4(5AC2)
AL1A1_HUMAN
[Raw transfer]



NAD_A_3(5AC0)
AL1A1_SHEEP
[Raw transfer]



PRO_A_7(2EIW)
?
[Raw transfer]



PRO_B_8(2EIW)
?
[Raw transfer]



ALA_B_11(2EIT)
?
[Raw transfer]



NAD_A_3(5KF7)
?
[Raw transfer]



GLU_B_4(2BHQ)
?
[Raw transfer]



DPR_A_7(2EJ6)
?
[Raw transfer]



GLU_A_3(2BHQ)
?
[Raw transfer]



GLU_A_3(2BHQ)
?
[Raw transfer]



ALA_A_9(2EIT)
?
[Raw transfer]



GLY_B_4(2J5N)
?
[Raw transfer]



GLY_A_3(2J5N)
?
[Raw transfer]



DPR_B_8(2EJ6)
?
[Raw transfer]



PRO_A_6(4E3X)
AL4A1_MOUSE
[Raw transfer]



MPD_B_17(2EJ6)
?
[Raw transfer]



MRD_A_7(2IY6)
?
[Raw transfer]



MRD_B_17(2IY6)
?
[Raw transfer]



MPD_A_11(2EJ6)
?
[Raw transfer]
1 PsiBlast_PDB 80.1654% -52 - C3 -5KF7 Error ?
109 Fugue 79.0449% -43 - C3 -4Q71 - ? -
84 HHSearch 78.2147% -44 - C3 -3HAZ - ? -
82 HHSearch 77.5155% -6 - C3 -5KF7 Error ?
2 PsiBlast_PDB 75.6646% -5 - C3 -3HAZ - ? -
88 HHSearch 64.1331% 8 - C3 -4NMD - ? -
89 HHSearch 63.9231% 8 - C3 -4NM9 - ? -
5 PsiBlast_PDB 53.9065%-115 - C2 -1TJ1 - PUTA_ECOLI -
6 PsiBlast_PDB 53.8065%-116 - C2 -2FZN - PUTA_ECOLI -
7 PsiBlast_PDB 53.7865%-111 - C2 -2FZM - PUTA_ECOLI -
8 PsiBlast_PDB 53.4065%-113 - C2 -1TJ2 - PUTA_ECOLI -
9 PsiBlast_PDB 53.3864%-122 - C2 -4JNZ - PUTA_ECOLI -
32 PsiBlast_CBE 53.3036% -10 - C3 -2IY6 2.7 ?
13 PsiBlast_PDB 53.0836% -7 - C3 -2EIW 3.3 ?
29 PsiBlast_CBE 53.0636% -9 - C3 -2EIW 3.4 ?
14 PsiBlast_PDB 53.0236% -10 - C3 -2BHP 9.0 ?
38 PsiBlast_CBE 52.9836% -10 - C3 -2EHU 9.3 ?
40 PsiBlast_CBE 52.9236% -9 - C3 -2EHQ 9.5 ?
31 PsiBlast_CBE 52.9036% -8 - C3 -2J5N 9.4 ?
98 HHSearch 52.7732% 14 - C3 -3QAN - ROCA1_BACHD -
20 PsiBlast_PDB 52.7436% -9 - C3 -2J5N 9.4 ?
34 PsiBlast_CBE 52.7336% -11 - C3 -2EIT 8.3 ?
18 PsiBlast_PDB 52.6836% -7 - C3 -2EJ6 3.0 ?
33 PsiBlast_CBE 52.6436% -8 - C3 -2EJ6 3.2 ?
36 PsiBlast_CBE 52.5536% -10 - C3 -2EII 9.0 ?
41 PsiBlast_CBE 52.4736% -10 - C3 -2BJK 9.5 ?
35 PsiBlast_CBE 52.4536% -9 - C3 -2EIT 8.9 ?
17 PsiBlast_PDB 52.3536% -10 - C3 -2EHQ 9.7 ?
100 HHSearch 52.2733% 5 - C3 -2EHQ 9.7 ?
19 PsiBlast_PDB 52.2736% -8 - C3 -2BHQ 3.7 ?
15 PsiBlast_PDB 52.2336% -10 - C3 -2BJK 9.2 ?
43 PsiBlast_CBE 52.1836% -10 - C3 -2BHP 9.1 ?
42 PsiBlast_CBE 52.0536% -8 - C3 -2BHQ 3.7 ?
99 HHSearch 52.0333% 4 - C3 -2BHQ 3.7 ?
39 PsiBlast_CBE 52.0136% -10 - C3 -2EHU 9.1 ?
37 PsiBlast_CBE 51.9936% -9 - C3 -2EII 8.9 ?
61 PsiBlast_CBE 51.9631% 1 - C3 -5AC2 9.6 AL1A1_HUMAN
63 PsiBlast_CBE 51.0131% 3 - C3 -4WB9 9.9 AL1A1_HUMAN
46 PsiBlast_CBE 50.9331% 2 - C3 -4X4L 10.0 AL1A1_HUMAN
72 PsiBlast_CBE 49.1632% 10 - C3 -5AC0 10.2 AL1A1_SHEEP
73 PsiBlast_CBE 48.1232% 12 - C3 -5AC0 10.0 AL1A1_SHEEP