@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VR28: (2017-11-30 )
MTTPLNERRIANAIRVLAMDAVQQANSGHPGAPMGMADIADVVWREFLNHNPNNPQWANRDRFVLSNGHGSMLQYALLHLTGYDLSIEDLKQFRQLHSKTPGHPEYGYAPGIETTTGPLGQGIANAVGFALAEKTLAAQFNKDDLKVVDHFTYCFLGDGCLMEGISHEVCSLAGTLQLGKLIAYYDDNGISIDGEVEGWFSDDTEERFKSYGWQVLRVDGHDADAIRQATVEAKAETQKPTIIICKTIIGLGSPNKQGKEDCHGAPLGKDEITLTREALGWTEEAFVIPADVYAAWDAKAKGNEAEAAWNEVFAQYQAKYPTEAAELLRRISGDLPTEFSAQADAFIRETNAKAETVATRKASQNTLQAFGPLLPELLGGSADLAGSNLTLWKGCQGVQENPAGNYVYYGVREFGMTAIANGVALHGGFIPYAATFLMFMEYARNAVRMSALMKQRVIHVYTHDSIGLGEDGPTHQPIEQIASLRGTPNLNTWRPADTVETAIAWKSALERKDGPTALIFSRQNLPFQTRTEEQIQNAAKGGYILAQEKGELKAIIIATGSEVSLAMEAYAQLEGVRVVSMPCAEEFMKQDAAYREAVLPAHIRARVAVEAAHVDYWWKFVGLDGKVIGMTTYGESAPAKDLFQFFGITTEAVVAAVKELTA

Atome Classification :

(22 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

TPP_A_3(4C7X)
?
[Raw transfer]



TPP_A_3(4C7X)
?
[Raw transfer]



DX5_A_17(4KXW)
TKT_HUMAN
[Raw transfer]
76 HHSearch 89.8368% -19 - C1 -2R8O - TKT1_ECOLI -
80 HHSearch 89.7768% -20 - C1 -1QGD - TKT1_ECOLI -
23 PsiBlast_CBE 89.5768% -19 - C1 -2R5N - TKT1_ECOLI -
5 PsiBlast_PDB 89.3968% -19 - C1 -1QGD - TKT1_ECOLI -
24 PsiBlast_CBE 89.2668% -16 - C1 -1QGD - TKT1_ECOLI -
25 PsiBlast_CBE 89.2267% -20 - C1 -5HHT - TKT1_ECOLI -
22 PsiBlast_CBE 89.0868% -19 - C1 -2R8O - TKT1_ECOLI -
21 PsiBlast_CBE 89.0468% -19 - C1 -2R8P - TKT1_ECOLI -
2 PsiBlast_PDB 89.0468% -19 - C1 -2R5N - TKT1_ECOLI -
4 PsiBlast_PDB 88.6268% -18 - C1 -2R8P - TKT1_ECOLI -
3 PsiBlast_PDB 88.5268% -19 - C1 -2R8O - TKT1_ECOLI -
6 PsiBlast_PDB 88.1867% -18 - C1 -5HHT - TKT1_ECOLI -
1 PsiBlast_PDB 86.6870% -26 - C1 -4XEU - ? -
26 PsiBlast_CBE 86.3662% -26 - C1 -5VRB - ? -
79 HHSearch 84.7163% -17 - C1 -5VRB - ? -
74 HHSearch 83.7363% -6 - C1 -3UPT - ? -
7 PsiBlast_PDB 83.0661% -12 - C1 -3UPT - ? -
28 PsiBlast_CBE 82.9561% -12 - C1 -3UPT - ? -
78 HHSearch 78.7349% -22 - C1 -5HYV - TKT_PICST -
20 PsiBlast_PDB 77.8347% -26 - C1 -2E6K - ? -
73 HHSearch 69.6646% 13 - C1 -4C7X 5.9 ?
41 PsiBlast_CBE 67.2545% 13 - C1 -4C7X 5.9 ?