@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VR30: (2017-11-30 )
MREYAVFTSESVSEGHPDKMADQISDAILDAILKEDPYARVACETLVKTGAVVLAGEITTTANIDVEAVVRQTVNGIGYHHSDLGFDGSTCAVINMIGKQSPEIAQGVDRQKPEDQGAGDQGLMFGYASRETDVLMPAPISYAHRLMERQAELRRSGALPWLRPDAKSQVTFAYENGKPVRLDAVVLSTQHDPEITQTQLKEAVIEEIIKPIIPAEMFHAATKFHINPTGMFVIGGPVGDCGLTGRKIIVDTYGGMARHGGGAFSGKDPSKVDRSAAYAGRYVAKNIVAAGLADKCEIQVSYAIGVAEPTSISINTFGTAKVSDELIIQLVREHFDLRPFGITRMLNLIQPMYKQTAAYGHFGREGSDTAFTWEKTDKVEALKDAAGL

Atome Classification :

(34 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

3PO_B_11(5T8S)
METK_NEIG1
[Raw transfer]



PPK_A_5(5A19)
METK2_HUMAN
[Raw transfer]



AMP_B_3(5T8T)
METK_NEIG1
[Raw transfer]



PPK_A_3(5A1I)
METK2_HUMAN
[Raw transfer]



PPK_A_4(5A1G)
METK2_HUMAN
[Raw transfer]



AMP_A_4(5T8S)
METK_NEIG1
[Raw transfer]



AMP_A_4(5T8S)
METK_NEIG1
[Raw transfer]



3PO_A_3(4ODJ)
?
[Raw transfer]



3PO_A_3(4ODJ)
?
[Raw transfer]



S7M_A_6(5A1G)
METK2_HUMAN
[Raw transfer]



ATP_B_9(1O93)
METK1_RAT
[Raw transfer]



ATP_B_9(1O9T)
METK1_RAT
[Raw transfer]



AMB_C_3(1QM4)
METK1_RAT
[Raw transfer]



LIS_A_3(1O90)
METK1_RAT
[Raw transfer]



ADP_B_9(1O92)
METK1_RAT
[Raw transfer]



UNL_A_6(3S82)
METK_MYCA1
[Raw transfer]



UNL_A_5(3S82)
METK_MYCA1
[Raw transfer]



UNL_A_6(3S82)
METK_MYCA1
[Raw transfer]



UNL_A_5(3S82)
METK_MYCA1
[Raw transfer]
80 HHSearch 85.9075% -67 - C5 -1RG9 - METK_ECOLI -
2 PsiBlast_PDB 85.7774% -67 - C5 -1P7L - METK_ECOLI -
26 PsiBlast_CBE 85.5074% -67 - C5 -1P7L - METK_ECOLI -
24 PsiBlast_CBE 85.4874% -67 - C5 -1P7L - METK_ECOLI -
21 PsiBlast_CBE 85.4174% -68 - C5 -1RG9 - METK_ECOLI -
3 PsiBlast_PDB 85.3774% -67 - C5 -1RG9 - METK_ECOLI -
23 PsiBlast_CBE 85.3174% -66 - C5 -1RG9 - METK_ECOLI -
25 PsiBlast_CBE 85.1874% -66 - C5 -1P7L - METK_ECOLI -
22 PsiBlast_CBE 85.1174% -68 - C5 -1RG9 - METK_ECOLI -
1 PsiBlast_PDB 83.7174% -73 - C5 -1FUG - METK_ECOLI -
6 PsiBlast_PDB 83.6174% -73 - C5 -1MXC - METK_ECOLI -
7 PsiBlast_PDB 83.5374% -70 - C5 -1XRA - METK_ECOLI -
9 PsiBlast_PDB 83.4573% -71 - C5 -1XRB - METK_ECOLI -
5 PsiBlast_PDB 83.3674% -71 - C5 -1MXB - METK_ECOLI -
4 PsiBlast_PDB 83.0674% -70 - C5 -1MXA - METK_ECOLI -
8 PsiBlast_PDB 82.4974% -70 - C5 -1XRC - METK_ECOLI -
27 PsiBlast_CBE 79.8469% -16 - C5 -5T8T 4.7 METK_NEIG1
10 PsiBlast_PDB 79.7369% -9 - C5 -5T8S 4.8 METK_NEIG1
28 PsiBlast_CBE 79.3669% -15 - C5 -5T8S 3.5 METK_NEIG1
79 HHSearch 79.2569% -10 - C5 -5T8S 4.8 METK_NEIG1
18 PsiBlast_PDB 74.6857% -42 - C5 -1O90 3.0 METK1_RAT
17 PsiBlast_PDB 74.4157% -42 - C5 -1QM4 2.0 METK1_RAT
34 PsiBlast_CBE 74.3357% -43 - C5 -1O9T 3.6 METK1_RAT
19 PsiBlast_PDB 74.2257% -42 - C5 -1O92 2.8 METK1_RAT
20 PsiBlast_PDB 74.1257% -42 - C5 -1O93 3.2 METK1_RAT
48 PsiBlast_CBE 73.3555% -12 - C5 -5A1G 5.0 METK2_HUMAN
49 PsiBlast_CBE 72.9555% -30 - C5 -5A19 3.4 METK2_HUMAN
47 PsiBlast_CBE 72.6955% -10 - C5 -5A1I 3.3 METK2_HUMAN
77 HHSearch 71.8351% -21 - C5 -4ODJ 2.5 ?
61 PsiBlast_CBE 69.7950% -15 - C5 -4ODJ 2.5 ?
29 PsiBlast_CBE 68.5357% -2 - C5 -3S82 2.8 METK_MYCA1
74 HHSearch 68.1958% -4 - C5 -3S82 2.8 METK_MYCA1
14 PsiBlast_PDB 68.1957% -3 - C5 -3S82 2.8 METK_MYCA1
73 HHSearch 68.1758% -3 - C5 -3S82 2.8 METK_MYCA1