@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VR68: (2017-12-01 )
MVSFGSQVDFSLPHIKIRGLNKFYQSQGQKLHALKEINLDIPQGKILGIIGKSGAGKSSLLRTLNGLEQVNTGSIHIHQQNIAELSHSELIQTRQRIGMIFQHFNLMSAKTVWENVALPLKVSNYNKADIDQRVNEVLALVGLADKSNYYPSQLSGGQKQRVGIARALVHHPEILLCDEATSALDPESTATILALLKKINQGLGLTIVLITHEMQVIREICDQVVVIDQGEIVEAGQVWSVFSRPEQQITQELLNLEQITLPFKINPLPDEDSTHIIVKLKYEAEAHQVPDFQELLARFKAPVNLYQSQVDTIQGHIIGSLLVGIPNVEIDLSSIQQDALTAIAQFEVLGYARPAH

Atome Classification :

(31 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_A_6(4YMV)
?
[Raw transfer]




ATP_J_5(4YMU)
?
[Raw transfer]




ATP_A_7(4YMU)
?
[Raw transfer]




ATP_J_5(4YMV)
?
[Raw transfer]




ANP_K_6(3C41)
?
[Raw transfer]




ANP_J_5(3C41)
?
[Raw transfer]




ACP_A_4(5X40)
CBIO_RHOCB
[Raw transfer]




AGS_B_6(3C4J)
?
[Raw transfer]




AGS_A_4(3C4J)
?
[Raw transfer]




ATP_A_5(1B0U)
HISP_SALTY
[Raw transfer]




ADP_A_5(2Q0H)
?
[Raw transfer]




128_A_2(2PMK)

[Raw transfer]




12D_A_2(3B5J)

[Raw transfer]




ACP_B_6(5X40)
CBIO_RHOCB
[Raw transfer]




ACP_A_4(4AYX)
ABCBA_HUMAN
[Raw transfer]




ADP_A_2(4U00)
?
[Raw transfer]




AT4_A_5(2OLK)
?
[Raw transfer]




AT4_D_8(2OLK)
?
[Raw transfer]




ADP_C_7(3B5Z)
MSBA_SALTY
[Raw transfer]




ADP_A_5(3B5Z)
MSBA_SALTY
[Raw transfer]




ADP_B_6(3B5Z)
MSBA_SALTY
[Raw transfer]




IPA_A_6(3TIF)
Y796_METJA
[Raw transfer]




24 PsiBlast_CBE 89.0944%-129 - C1 -3TUI - METN_ECOLI -
3 PsiBlast_PDB 87.6444%-122 - C1 -3TUZ - METN_ECOLI -
23 PsiBlast_CBE 87.5344%-123 - C1 -3TUZ - METN_ECOLI -
22 PsiBlast_CBE 87.2144%-121 - C1 -3TUZ - METN_ECOLI -
2 PsiBlast_PDB 86.5844%-119 - C1 -3TUI - METN_ECOLI -
21 PsiBlast_CBE 86.3944%-127 - C1 -3TUZ - METN_ECOLI -
25 PsiBlast_CBE 85.9244%-118 - C1 -3TUI - METN_ECOLI -
26 PsiBlast_CBE 84.5644%-119 - C1 -3TUI - METN_ECOLI -
4 PsiBlast_PDB 83.6943%-126 * C1 *3TUJ - METN_ECOLI -
130 HHSearch 83.6843%-110 - C1 -3TUI - METN_ECOLI -
1 PsiBlast_PDB 82.0844%-116 - C1 -3DHW - METN_ECOLI -
120 Fugue 81.8042%-123 - C1 -3TUZ - METN_ECOLI -
129 HHSearch 80.0643%-110 - C1 -3DHW - METN_ECOLI -
38 PsiBlast_CBE 60.7641% -62 - C1 -2OLK 6.3 ?
31 PsiBlast_CBE 59.8743% -66 - C1 -4YMU 5.6 ?
10 PsiBlast_PDB 59.7343% -67 - C1 -4YMV 7.0 ?
30 PsiBlast_CBE 59.3943% -65 - C1 -4YMV 4.5 ?
59 PsiBlast_CBE 59.3532%-159 - C1 -3PUZ - MALK_ECOLI -
7 PsiBlast_PDB 59.0443% -63 - C1 -4YMS - ? -
11 PsiBlast_PDB 58.9443% -65 - C1 -4YMW - ? -
9 PsiBlast_PDB 58.8943% -62 - C1 -4YMU 5.6 ?
5 PsiBlast_PDB 57.6143% -59 - C1 -4U00 6.3 ?
33 PsiBlast_CBE 56.7841% -58 - C1 -3C4J 5.1 ?
16 PsiBlast_PDB 56.6341% -56 - C1 -2Q0H 5.4 ?
17 PsiBlast_PDB 54.7241% -61 - C1 -3C4J 6.6 ?
54 PsiBlast_CBE 50.1740% -22 - C1 -1B0U 4.0 HISP_SALTY
44 PsiBlast_CBE 46.4737% -35 - C1 -3TIF 3.8 Y796_METJA
107 PsiBlast_CBE 41.3333% -43 - C1 -4AYX 3.9 ABCBA_HUMAN
117 PsiBlast_CBE 26.3032% - - C1 -3B5Z 2.9 MSBA_SALTY
116 PsiBlast_CBE 26.3032% - - C1 -3B5Z 2.3 MSBA_SALTY
118 PsiBlast_CBE 26.2832% - - C1 -3B5Z 2.3 MSBA_SALTY