@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VR70: (2017-12-01 )
MVFMGFNCGIVGLPNVGKSTLFNALTKAAIAAENFPFCTIEPNTGIVPVPDPRLDKLAAIVNPQRVLPTTMEFVDIAGLVAGASKGEGLGNQFLANIRETDAIAHVVRCFEDENVIHVNGKIDPLDDIATINTELALADLETVAKAILRLTKVAKGGDKEAVATKAVLEKIQPLLDEGKPARAADLSDDERKLIRGFGLMTLKPTMYIANVAEDGFENNPHLEAVKKLAAEENAIVVPLCNQIEAEISLLEDEDRAEFLEAMGMEEPGLNVVIRAGYKLLGLQTYFTAGVQEVRAWTLKVGATAPQAAGVIHTDFEKGFIRAEVVAYDDFVQYNGENGAKEAGKWRLEGKTYVVQDGDVMHFRFNV

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ANP_B_9(5EE3)
OLA1_ORYSJ
[Raw transfer]




GDP_A_2(2DBY)
?
[Raw transfer]




GDP_A_2(2DBY)
?
[Raw transfer]




GNP_A_3(5EE9)
OLA1_ORYSJ
[Raw transfer]




ANP_A_3(5EE3)
OLA1_ORYSJ
[Raw transfer]




GNP_A_3(1WF3)
ERA_THET8
[Raw transfer]




GDP_A_3(4NON)
?
[Raw transfer]




G4P_B_10(1LNZ)
OBG_BACSU
[Raw transfer]




GOL_B_6(5EE9)
OLA1_ORYSJ
[Raw transfer]




82 HHSearch 89.1273%-116 - C3 -1JAL - YCHF_HAEIN -
1 PsiBlast_PDB 89.1073%-117 - C3 -1JAL - YCHF_HAEIN -
85 HHSearch 76.6252% -2 - C3 -2DBY 8.0 ?
4 PsiBlast_PDB 76.5542% -50 - C3 -5EE1 - OLA1_ORYSJ -
22 PsiBlast_CBE 76.0642% -50 - C3 -5EE3 6.7 OLA1_ORYSJ
3 PsiBlast_PDB 75.3252% 0 - C3 -2DBY 8.0 ?
2 PsiBlast_PDB 74.4452% 18 - C3 -2DWQ - ? -
5 PsiBlast_PDB 74.3042% -48 - C3 -5EE3 6.7 OLA1_ORYSJ
21 PsiBlast_CBE 74.2742% -50 - C3 -5EE9 2.5 OLA1_ORYSJ
6 PsiBlast_PDB 73.3442% -50 - C3 -5EE9 5.8 OLA1_ORYSJ
73 Fugue 72.0841% - - C3 -5EE0 - OLA1_ORYSJ -
84 HHSearch 71.8340% 7 - C3 -1NI3 - OLA1_SCHPO -
7 PsiBlast_PDB 71.1339% 9 - C3 -1NI3 - OLA1_SCHPO -
74 Fugue 46.5823% 24 - C3 -1WXQ - ? -
9 PsiBlast_PDB 42.1435%-120 - C3 -1LNZ - OBG_BACSU -
11 PsiBlast_PDB 39.6527%-117 - C3 -5M04 - OBG_ECOLI -
81 Fugue 39.4015% -93 - C3 -1NRJ - SRPB_YEAST -
90 HHSearch 37.7031%-130 - C3 -5M04 - OBG_ECOLI -
93 HHSearch 36.9138%-122 - C3 -1LNZ - OBG_BACSU -
70 PsiBlast_CBE 36.6859%-186 - C3 -3R9W - ERA_AQUAE -