@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VR94: (2017-12-01 )
MSSTILVIHGPNLNLLGKREPEVYGHLTLDNINQQLIAQAEQASITLDTFQSNWEGAIVDRIHQAQTEGVKLIIINPAALTHTSVALRDALLGVAIPFIEVHLSNVHAREAFRHHSYLSDKAIGVICGLGAKGYSFALDYAIEKIQPSNPN

Atome Classification :

(21 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

TRS_W_(3KIP)
3DHQ_CANAL
[Raw transfer]




1 PsiBlast_PDB 95.8799%-178 - C5 -4RC9 - AROQ_ACIBT -
183 HHSearch 95.6299%-194 - C5 -5WRF - AROQ_ACIBT -
5 PsiBlast_PDB 94.3199%-191 - C5 -5WRF - AROQ_ACIBT -
3 PsiBlast_PDB 94.2799%-176 - C5 -4RHC - AROQ_ACIBT -
2 PsiBlast_PDB 94.2599%-187 - C5 -5B6P - AROQ_ACIBT -
6 PsiBlast_PDB 93.3999%-189 - C5 -5X47 - AROQ_ACIBT -
4 PsiBlast_PDB 93.1199%-184 - C5 -4ZC1 - AROQ_ACIBT -
192 HHSearch 86.0064%-186 - C5 -3LWZ - AROQ_YERPE -
193 HHSearch 85.2464%-192 - C5 -3LWZ - AROQ_YERPE -
189 HHSearch 84.8863%-169 - C5 -1UQR - AROQ_ACTPL -
44 PsiBlast_CBE 84.6764%-179 - C5 -1UQR - AROQ_ACTPL -
45 PsiBlast_CBE 84.5664%-186 - C5 -1UQR - AROQ_ACTPL -
190 HHSearch 82.6563%-165 - C5 -1UQR - AROQ_ACTPL -
52 PsiBlast_CBE 82.2064%-180 - C5 -1UQR - AROQ_ACTPL -
43 PsiBlast_CBE 81.5164%-187 - C5 -1UQR - AROQ_ACTPL -
8 PsiBlast_PDB 80.7064%-180 - C5 -1UQR - AROQ_ACTPL -
7 PsiBlast_PDB 80.4067%-196 - C- -4L8L - AROQ1_PSEAE -
53 PsiBlast_CBE 79.9964%-183 - C5 -1UQR - AROQ_ACTPL -
188 HHSearch 79.8366%-188 - C- -4L8L - AROQ1_PSEAE -
11 PsiBlast_PDB 77.7748%-180 - C5 -1GQO - AROQ_BACSU -
54 PsiBlast_CBE 63.3658% -50 - C5 -3KIP 3.3 3DHQ_CANAL