@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VRG7: (2017-12-02 )
MLASLIGGIFGTKNERELKRMRKIVEQINALEPTISALSDADLSAKTPEFKQRYNNGESLDKLLPEAFAVCREAAKRVMGMRHYDVQLIGGITLHEGKIAEMRTGEGKTLMGTLACYLNALSGEGVHVITVNDYLAQRDAELNRPLFEFLGLSIGTIYSMQEPAEKAAAYLADITYGTNNEFGFDYLRDNMVFSLAEKKQRGLHYAIIDEVDSILIDEARTPLIISGQSEDSSHLYTAINTIPPKLRPQKEEKVADGGHFWIDEKQRSVEMTEIGYETVEQELIQMGLLAEGESLYSATNLNLVHHVSAAIRAHVLFQRDVHYIIHDGEVVIVDEHTGRTMPGRRWSEGLHQAVEAKEGLAIQPENQTLATTTFQNYFRPYKKLSGMTGTADTEAAEMKEIYGLDVVIIPTHRPMIRNDQNDLIYLNRNGKYNAIIQEIMNIRQQGVAPILIGTATIEASEILSSKLKQAGIHHEVLNAKQHEREADIIAQAGSPNAVTIATNMAGRGTDIILGGNWKAKLAKLENPTPEDEARLKAQWEQDHEDVLQAGGLHIIGSERHESRRIDNQLRGRAGRQGDPGVSRFYLSLEDDLMRIFAGDRVVAMMRAMGLKEDEAIEHKMVSRSIENAQRKVEARNFDIRKNLLKYDDVNNEQRKIIYSQRDEILAENTLQEYVEEMHREVMQAMIANFIPPESIHDQWDVEGLENALRIDLGIELPVQEWLEQDRRLDEEGLVERISDEVIARYRQRRAQMGDESAAMLERHFVLNSLDRHWKDHLAAMDYLRQGIHLRGYAQKNPEQEYKKESFNLFVNMLGVIKTDVVTDLVTDLSRVHIPTPEELAEMEAQQQQQAEAMKLSFEHDDVDGLTGEVTASQEALNESATEQQTFPVPESRNAPCPCGSGLKYKQCHGKI

Atome Classification :

(28 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ADP_A_8(1M74)
SECA_BACSU
[Raw transfer]



ADP_A_2(4YS0)
SECA_THEMA
[Raw transfer]



ADP_A_2(4YS0)
SECA_THEMA
[Raw transfer]



ADP_A_3(3JUX)
SECA_THEMA
[Raw transfer]



ADP_A_3(3JUX)
SECA_THEMA
[Raw transfer]



ADP_A_3(1TF2)
SECA_BACSU
[Raw transfer]



ADP_A_2(5K9T)
?
[Raw transfer]



ADP_B_8(3BXZ)
SECA_ECOLI
[Raw transfer]



ADP_A_7(3BXZ)
SECA_ECOLI
[Raw transfer]



ADP_B_8(3BXZ)
SECA_ECOLI
[Raw transfer]
54 HHSearch 80.0161% -73 - C4 -2FSF - SECA_ECOLI -
7 PsiBlast_PDB 77.2646% -68 - C4 -1TF5 - SECA_BACSU -
6 PsiBlast_PDB 76.9346% -69 - C4 -1TF2 5.0 SECA_BACSU
56 HHSearch 76.7751% -60 - C4 -1M6N - SECA_BACSU -
13 PsiBlast_PDB 76.7549% -61 - C4 -3JV2 - SECA_BACSU -
5 PsiBlast_PDB 76.7058% -73 - C4 -2FSG - SECA_ECOLI -
22 PsiBlast_CBE 76.4849% -62 - C4 -3JV2 - SECA_BACSU -
4 PsiBlast_PDB 76.1060% 3 - C4 -2VDA - SECA_ECOLI -
68 Fugue 75.8049% -51 - C4 -1M6N - SECA_BACSU -
51 HHSearch 75.6561% 5 - C4 -2VDA - SECA_ECOLI -
8 PsiBlast_PDB 75.6546% -56 - C4 -3IQY - SECA_BACSU -
69 Fugue 75.5053% 24 - C4 -2IPC - SECA_THET8 -
10 PsiBlast_PDB 75.2549% -54 - C4 -1M74 5.5 SECA_BACSU
9 PsiBlast_PDB 74.8949% -57 - C4 -1M6N - SECA_BACSU -
14 PsiBlast_PDB 74.6648% -54 - C4 -3IQM - SECA_BACSU -
49 HHSearch 73.5153% 32 - C4 -2IPC - SECA_THET8 -
50 HHSearch 73.3253% 35 - C4 -2IPC - SECA_THET8 -
21 PsiBlast_CBE 73.2660% 6 - C4 -2FSI - SECA_ECOLI -
12 PsiBlast_PDB 72.5549% -45 - C4 -2IBM - SECA_BACSU -
18 PsiBlast_PDB 72.3446% -60 - C4 -5EUL - SECA_BACSU -
52 HHSearch 68.8449% 24 - C4 -4YS0 6.3 SECA_THEMA
53 HHSearch 68.8249% 18 - C4 -3JUX 5.1 SECA_THEMA
25 PsiBlast_CBE 67.1143% 19 - C4 -4YS0 6.3 SECA_THEMA
20 PsiBlast_PDB 66.9143% 15 - C4 -3JUX 5.1 SECA_THEMA
15 PsiBlast_PDB 61.4065% -3 - C4 -5K9T 6.2 ?
58 HHSearch 51.8466% 7 * C4 *3BXZ 6.1 SECA_ECOLI
26 PsiBlast_CBE 32.4160% 38 - C4 -3BXZ 2.8 SECA_ECOLI
27 PsiBlast_CBE 30.7960% 42 - C4 -3BXZ 2.7 SECA_ECOLI