@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VRJ0: (2017-12-03 )
MKLSRIALATMLVAAPLAAANAGVTVTPLLLGYTFQDSQHNNGGKDGNLTNSPELQDDLFVGAALGIELTPWLGFEAEYNQVKGDVDGASAGAEYKQKQINGNFYVTSDLITKNYDSKIKPYVLLGAGHYKYDFDGVNRGTRGNSEEGTLGNAGVGAFWRLNDALSLRTEARATYNADEEFWNYTALAGLNVVLGGHLKPAAPVVVEVAPVEPTPVAPQPQELTEDLNMELRVFFDTNKSNIKDQYKPEIAKVAEKLSEYPNATARIEGHTDNTGPRKLNERLSLARANSVKSALVNEYNVDASRLSTQGFAWDQPIADNKTKEGRAMNRRVFATITGSRTVVVQPGQEAAAPAAAQ

Atome Classification :

(42 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

GLY_F_14(3TD3)
OMP38_ACIBA
[Raw transfer]




GLY_C_11(3TD3)
OMP38_ACIBA
[Raw transfer]




GLY_E_13(3TD3)
OMP38_ACIBA
[Raw transfer]




API_C_11(4G88)
OMP38_ACIBA
[Raw transfer]




GLY_G_15(3TD3)
OMP38_ACIBA
[Raw transfer]




ALA_B_11(4G4Y)
OMP38_ACIBA
[Raw transfer]




GLY_A_9(3TD3)
OMP38_ACIBA
[Raw transfer]




GLY_H_16(3TD3)

[Raw transfer]




DAL_F_19(4G4Z)
OMP38_ACIBA
[Raw transfer]




GLY_D_12(3TD3)
OMP38_ACIBA
[Raw transfer]




ALA_D_15(4G4Y)
OMP38_ACIBA
[Raw transfer]




GLY_B_10(3TD3)
OMP38_ACIBA
[Raw transfer]




API_G_15(3TD4)
OMP38_ACIBA
[Raw transfer]




DAL_B_11(4G4Z)
OMP38_ACIBA
[Raw transfer]




ALA_G_21(4G4Y)
OMP38_ACIBA
[Raw transfer]




DAL_G_21(4G4Z)
OMP38_ACIBA
[Raw transfer]




ALA_E_17(4G4Y)
OMP38_ACIBA
[Raw transfer]




API_B_10(4G88)
OMP38_ACIBA
[Raw transfer]




ALA_F_19(4G4Y)
OMP38_ACIBA
[Raw transfer]




DAL_D_15(4G4Z)
OMP38_ACIBA
[Raw transfer]




API_F_14(3TD4)
OMP38_ACIBA
[Raw transfer]




ALA_C_13(4G4Y)
OMP38_ACIBA
[Raw transfer]




DAL_E_17(4G4Z)
OMP38_ACIBA
[Raw transfer]




DAL_H_23(4G4Z)

[Raw transfer]




API_B_10(3TD4)
OMP38_ACIBA
[Raw transfer]




API_E_13(3TD4)
OMP38_ACIBA
[Raw transfer]




API_B_10(3TD4)
OMP38_ACIBA
[Raw transfer]




DAL_C_13(4G4Z)
OMP38_ACIBA
[Raw transfer]




API_C_11(3TD4)
OMP38_ACIBA
[Raw transfer]




7QA_C_16(5U1H)
PORF_PSEAE
[Raw transfer]




ALA_H_23(4G4Y)

[Raw transfer]




API_D_12(3TD4)
OMP38_ACIBA
[Raw transfer]




API_H_16(3TD4)

[Raw transfer]




7QA_C_16(5U1H)
PORF_PSEAE
[Raw transfer]




7QA_A_5(5U1H)
PORF_PSEAE
[Raw transfer]




7QA_D_21(5U1H)

[Raw transfer]




7QA_B_8(5U1H)
PORF_PSEAE
[Raw transfer]




SRT_G_17(4G88)
OMP38_ACIBA
[Raw transfer]




SRT_D_13(4G88)
OMP38_ACIBA
[Raw transfer]




58 PsiBlast_CBE 81.61100% -49 - C5 -3TD3 2.7 OMP38_ACIBA
37 PsiBlast_CBE 81.37100% -48 - C5 -4G4Y 2.8 OMP38_ACIBA
30 PsiBlast_CBE 81.32100% -51 - C5 -4G4Z 3.0 OMP38_ACIBA
27 PsiBlast_CBE 81.25100% -47 - C5 -4G88 3.0 OMP38_ACIBA
51 PsiBlast_CBE 81.23100% -56 - C5 -3TD4 3.1 OMP38_ACIBA
34 PsiBlast_CBE 81.08100% -52 - C5 -4G4Z 2.8 OMP38_ACIBA
53 PsiBlast_CBE 80.98100% -49 - C5 -3TD4 3.0 OMP38_ACIBA
23 PsiBlast_CBE 80.76100% -46 - C5 -4G88 - OMP38_ACIBA -
41 PsiBlast_CBE 80.74100% -51 - C5 -4G4Y 2.7 OMP38_ACIBA
55 PsiBlast_CBE 80.67100% -56 - C5 -3TD4 2.9 OMP38_ACIBA
62 PsiBlast_CBE 80.52100% -48 - C5 -3TD3 2.6 OMP38_ACIBA
25 PsiBlast_CBE 80.52100% -52 - C5 -4G88 3.0 OMP38_ACIBA
49 PsiBlast_CBE 80.35100% -38 - C5 -3TD4 3.1
2 PsiBlast_PDB 80.09100% -53 - C5 -3TD4 - OMP38_ACIBA -
57 PsiBlast_CBE 79.99100% -45 - C5 -3TD3 2.6 OMP38_ACIBA
22 PsiBlast_CBE 79.96100% -52 - C5 -4G88 4.1 OMP38_ACIBA
28 PsiBlast_CBE 79.91100% -44 - C5 -4G4Z 2.9
84 HHSearch 79.85100% -62 - C5 -3TD4 2.9 OMP38_ACIBA
39 PsiBlast_CBE 79.82100% -47 - C5 -4G4Y 3.0 OMP38_ACIBA
21 PsiBlast_CBE 79.75100% -44 - C5 -4G88 - -
35 PsiBlast_CBE 79.67100% -49 - C5 -4G4Y 2.8
40 PsiBlast_CBE 79.63100% -45 - C5 -4G4Y 3.5 OMP38_ACIBA
50 PsiBlast_CBE 79.62100% -50 - C5 -3TD4 3.1 OMP38_ACIBA
56 PsiBlast_CBE 79.34100% -44 - C5 -3TD3 2.6
26 PsiBlast_CBE 79.23100% -46 - C5 -4G88 2.7 OMP38_ACIBA
36 PsiBlast_CBE 79.22100% -47 - C5 -4G4Y 2.8 OMP38_ACIBA
54 PsiBlast_CBE 79.19100% -45 - C5 -3TD4 3.0 OMP38_ACIBA
31 PsiBlast_CBE 79.10100% -43 - C5 -4G4Z 2.9 OMP38_ACIBA
32 PsiBlast_CBE 78.95100% -44 - C5 -4G4Z 3.0 OMP38_ACIBA
60 PsiBlast_CBE 78.94100% -47 - C5 -3TD3 3.1 OMP38_ACIBA
61 PsiBlast_CBE 78.77100% -44 - C5 -3TD3 2.6 OMP38_ACIBA
85 HHSearch 78.70100% -49 - C5 -3TD3 2.9 OMP38_ACIBA
29 PsiBlast_CBE 78.50100% -44 - C5 -4G4Z 3.0 OMP38_ACIBA
33 PsiBlast_CBE 78.47100% -49 - C5 -4G4Z 2.8 OMP38_ACIBA
52 PsiBlast_CBE 78.15100% -47 - C5 -3TD4 3.0 OMP38_ACIBA
38 PsiBlast_CBE 77.35100% -41 - C5 -4G4Y 3.4 OMP38_ACIBA
59 PsiBlast_CBE 77.11100% -40 - C5 -3TD3 3.1 OMP38_ACIBA
92 HHSearch 59.8841% -46 - C5 -5U1H 2.5 PORF_PSEAE
63 PsiBlast_CBE 59.3441% -43 - C5 -5U1H 2.8
64 PsiBlast_CBE 59.0241% -53 - C5 -5U1H 2.5 PORF_PSEAE
93 HHSearch 57.4541% -33 - C5 -5U1H 2.9 PORF_PSEAE
65 PsiBlast_CBE 56.7641% -47 - C5 -5U1H 2.9 PORF_PSEAE