@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VS46: (2017-12-06 )
MSFVPQIKIPATYMRGGTSKGVFFKLDDLPEKAQVAGQARDQLLLRVIGSPDPYGKQIDGMGGATSSTSKTVILAKSTQPDHDVDYLFGQVSIDQAFVDWSGNCGNLTAAVGSFAISNGLVDADRIPENGLCTVRIWQKNIQKTIIAHVPITNGQVQETGDFELDGVTFPAAEVQIEFLDPADDGEEGGDMFPTGNVVDQLDVPEIGSFQATFINAGIPTIFLNAEDLGYEGTELQDHINGDAAALARFEKIRAYGAVQMGLIKDISEAAARQHTPKIAFVSKPKNYTASSGKNVSENDVDLLVRALSMGKLHHAMMGTAAVAIGTAAAIPGTLVNLAAGGGEREAVRFGHPSGTLRVGAQAELTNGQWVVKKAIMSRSARVLMEGWVRIPGDSS

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

EDO_A_4(2PW0)
PRPF_SHEON
[Raw transfer]




EDO_B_8(2PW0)
PRPF_SHEON
[Raw transfer]




GOL_A_10(2H9F)
?
[Raw transfer]




GOL_A_10(2H9F)
?
[Raw transfer]




11 HHSearch 90.3181% -64 - C4 -5K87 - ? -
10 HHSearch 88.8674% -98 - C4 -2H9F 2.3 ?
3 PsiBlast_PDB 88.3773% -98 - C4 -2H9F 2.3 ?
2 PsiBlast_PDB 88.3181% -41 - C4 -5K87 - ? -
1 PsiBlast_PDB 88.2981% -43 - C4 -2PW0 4.0 PRPF_SHEON
9 PsiBlast_CBE 81.8881% -58 - C4 -2PW0 2.9 PRPF_SHEON
12 HHSearch 72.6742% -61 - C4 -3G7K - MII_EUBBA -
13 HHSearch 72.3042% -60 - C4 -3G7K - MII_EUBBA -
4 PsiBlast_PDB 71.0242% -50 - C4 -3G7K - MII_EUBBA -
34 Fugue 33.6721% 14 * C5 *3ZK4 - ? -
27 HHSearch 32.3118%-145 - C4 -2Q9H - DAPF_HAEIN -
18 HHSearch 32.1613%-182 - C4 -4JBD - 4HYPE_PSEP1 -
23 HHSearch 32.1219%-154 * C4 *2OTN - DAPF_BACAN -
29 HHSearch 31.5719%-136 - C4 -5HA4 - DAPF_ACIB3 -
30 HHSearch 30.9719%-133 - C4 -5HA4 - DAPF_ACIB3 -
16 HHSearch 26.1817% -11 - C4 -4JUU - 4HYPE_XANCP -
36 Fugue 25.7221% -16 - C1 -5L45 - ? -
35 Fugue 25.6629% 1 - C5 -1ZLD - ? -
20 HHSearch 24.5821%-113 - C4 -1PQH - PAND_ECOLI -
21 HHSearch 23.3722% -52 - C4 -5H2G - DAPF_CORGL -