@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VS47: (2017-12-06 )
MSSLSQVNADVLKQAQQRIQQDLLTTLAAFSIPEPLKSAVHHAVMLGGKRVRPALCYATASLQDNPNFAAARRAAVAVELIHCYSLAHDDLPCMDNDLLRRGQPTCHVAFGEDTALLAGDILQSMAFEVLGSRLFDEQGQGTDAAIVLKQIQILATASSKMVCGQVLDLQAEAKQISQDELENIHRNKTGALIQAAIMMGAVTIFPGTDQAIPKLRQYGQAIGLAFQVQDDILDITSSTETLGKTAGKDEQVQKSTYPALMGLEQAQIYAKELHDQAFEALAHFGENAKELVEISQFLLARTN

Atome Classification :

(54 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

RIS_B_12(1RQJ)
ISPA_ECOLI
[Raw transfer]




RIS_A_10(1RQJ)
ISPA_ECOLI
[Raw transfer]




IPE_A_4(4LLT)
?
[Raw transfer]




IPE_A_4(4LLT)
?
[Raw transfer]




DST_D_11(3KRF)
?
[Raw transfer]




GST_A_4(4LLS)
?
[Raw transfer]




DST_D_6(3OAC)
?
[Raw transfer]




GST_A_4(4LLS)
?
[Raw transfer]




IPE_B_9(4LLT)
?
[Raw transfer]




DST_D_11(3OAB)
?
[Raw transfer]




DST_A_10(1RQI)
ISPA_ECOLI
[Raw transfer]




IPE_A_7(3Q1O)
?
[Raw transfer]




IPE_C_18(3Q1O)
?
[Raw transfer]




IPE_D_24(3Q1O)
?
[Raw transfer]




IPE_B_13(3Q1O)
?
[Raw transfer]




DST_D_11(3OAB)
?
[Raw transfer]




DST_D_11(3KRO)
?
[Raw transfer]




GPP_D_9(3KRP)
?
[Raw transfer]




IPE_B_7(3OYR)
?
[Raw transfer]




DST_B_9(1RQI)
ISPA_ECOLI
[Raw transfer]




IPE_B_13(3Q1O)
?
[Raw transfer]




GST_B_9(4LLS)
?
[Raw transfer]




IPE_A_3(4LFE)
?
[Raw transfer]




GOL_B_5(4F62)
?
[Raw transfer]




IPE_B_13(3PDE)
?
[Raw transfer]




IPE_A_6(3PDE)
?
[Raw transfer]




GOL_A_4(4F62)
?
[Raw transfer]




GOL_B_5(4F62)
?
[Raw transfer]




IPE_D_22(3PDE)
?
[Raw transfer]




IPE_D_22(3PDE)
?
[Raw transfer]




GOL_A_4(4F62)
?
[Raw transfer]




IPE_D_7(3KRC)
?
[Raw transfer]




DST_A_6(3OAB)
?
[Raw transfer]




IPE_A_3(4LLT)
?
[Raw transfer]




IPE_B_7(4LFE)
?
[Raw transfer]




GOL_A_5(3Q2Q)
?
[Raw transfer]




IPR_A_9(1RQJ)
ISPA_ECOLI
[Raw transfer]




IPE_B_8(4LLT)
?
[Raw transfer]




IPE_A_4(4LFG)
?
[Raw transfer]




IPR_B_11(1RQJ)
ISPA_ECOLI
[Raw transfer]




IPE_B_9(4LFG)
?
[Raw transfer]




PPV_A_6(3KRF)
?
[Raw transfer]




PPV_A_5(3KRP)
?
[Raw transfer]




DMA_A_6(4GP2)
?
[Raw transfer]




DMA_A_5(4GP2)
?
[Raw transfer]




IPE_A_5(3KRC)
?
[Raw transfer]




IPE_A_5(3KRO)
?
[Raw transfer]




DMS_B_13(3ZOU)
?
[Raw transfer]




6H6_A_4(3ZMB)
?
[Raw transfer]




6H6_B_6(3ZMB)
?
[Raw transfer]




1 PsiBlast_PDB 88.4344%-109 - C1 -4F62 2.4 ?
17 PsiBlast_PDB 84.3341% -69 - C1 -3LOM - ? -
94 HHSearch 83.9942% -69 - C1 -4LLT 3.8 ?
95 HHSearch 82.9539% -97 - C1 -3M0G - ? -
99 HHSearch 82.9241% -74 - C1 -3OAB 2.8 ?
93 HHSearch 82.8842% -69 - C1 -4LLS 5.7 ?
92 HHSearch 82.7841% -56 - C1 -5XN5 - ? -
87 HHSearch 82.2245% -51 - C1 -3TS7 - ? -
83 HHSearch 81.9844% -74 - C1 -4F62 2.4 ?
21 PsiBlast_CBE 81.5244%-113 - C1 -4F62 1.8 ?
88 HHSearch 81.4446% -53 - C1 -3LSN - ? -
38 PsiBlast_CBE 81.3242% -68 - C1 -4LLS 5.2 ?
37 PsiBlast_CBE 80.8542% -66 - C1 -4LLT 5.4 ?
91 HHSearch 80.6039%-103 * C1 *3LVS - ? -
98 HHSearch 80.3941% -92 - C1 -3KRA - ? -
20 PsiBlast_PDB 80.1142% -67 - C1 -4LLT 5.2 ?
19 PsiBlast_PDB 79.5142% -67 - C1 -4LLS 5.7 ?
97 HHSearch 79.4837% -74 - C1 -5AYP - ISPA_GEOSE -
96 HHSearch 77.2037% -73 - C1 -5AYP - ISPA_GEOSE -
101 HHSearch 76.3736% -54 - C- -1RTR - ? -
84 HHSearch 75.5844% -80 - C1 -4F62 1.8 ?
89 HHSearch 74.7537% -46 - C1 -3PDE 3.0 ?
10 PsiBlast_PDB 73.9050% -58 - C1 -3ZMB 3.1 ?
29 PsiBlast_CBE 73.2150% -59 - C1 -3ZOU 3.6 ?
90 HHSearch 71.3037% -47 - C1 -3PDE 3.1 ?
5 PsiBlast_PDB 71.1043% -11 - C1 -3KRF 3.3 ?
4 PsiBlast_PDB 70.9943% -17 - C1 -3KRC 2.7 ?
27 PsiBlast_CBE 70.9643% -23 - C1 -3KRC 3.7 ?
23 PsiBlast_CBE 70.4643% 6 - C1 -3OAB 2.8 ?
24 PsiBlast_CBE 70.3743% -16 - C1 -3KRP 4.5 ?
25 PsiBlast_CBE 70.2743% 4 - C1 -3KRO 3.1 ?
8 PsiBlast_PDB 70.2543% -18 - C1 -3OAB 2.6 ?
6 PsiBlast_PDB 70.1443% -15 - C1 -3KRO 3.0 ?
22 PsiBlast_CBE 69.8943% 5 - C1 -3OAC 2.9 ?
7 PsiBlast_PDB 69.6843% -18 - C1 -3KRP 3.4 ?
42 PsiBlast_CBE 69.6242%-107 - C1 -4LFE 3.1 ?
26 PsiBlast_CBE 69.5643% 4 - C1 -3KRF 2.9 ?
100 HHSearch 67.7835% -20 - C1 -3Q1O 4.0 ?
41 PsiBlast_CBE 67.5342% -79 - C1 -4LFE 5.1 ?
39 PsiBlast_CBE 66.6142% -78 - C1 -4LFG 5.2 ?
40 PsiBlast_CBE 66.3542% -79 - C1 -4LFG 5.4 ?
15 PsiBlast_PDB 62.6748% -6 - C1 -1RQI 3.4 ISPA_ECOLI
33 PsiBlast_CBE 62.1848% -7 - C1 -1RQJ 4.8 ISPA_ECOLI
34 PsiBlast_CBE 62.0548% -9 - C1 -1RQI 3.9 ISPA_ECOLI
14 PsiBlast_PDB 62.0148% -6 - C1 -1RQJ 5.5 ISPA_ECOLI
54 PsiBlast_CBE 53.4735% -15 - C1 -3Q1O 4.1 ?
43 PsiBlast_CBE 53.3542% -37 - C1 -3PDE 3.0 ?
52 PsiBlast_CBE 53.0735% -18 - C1 -3Q1O 3.9 ?
53 PsiBlast_CBE 51.9735% -10 - C1 -3Q1O 4.0 ?
44 PsiBlast_CBE 51.8742% -39 - C1 -3PDE 3.1 ?
64 PsiBlast_CBE 51.3731% -47 - C1 -4GP2 3.7 ?
51 PsiBlast_CBE 50.1135% -13 - C1 -3Q1O 3.9 ?
60 PsiBlast_CBE 40.9132% -83 - C1 -3Q2Q 2.3 ?
57 PsiBlast_CBE 32.6937% 6 - C1 -3OYR 3.4 ?