@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VSB9: (2017-12-07 )
MKMSRRAYAEMFGPTVGDRIRLADTALFIEVEQDLTTYGEEVKFGGGKVIRDGMGQSQLLADEVADTVITNALIVDWWGIVKADVGLKNGRIWKIGKAGNPDIQPDITIPLGAATEVIAGEGQILTAGGIDTHIHWICPQQVETALMSGTTTMVGGGTGPAAGTSATTVTPGPWHIATMLQAIDDLPMNIGLLGKGNLSLPDPIREQIKAGVIGLKLHEDWGSTPAAIDNCLSVADEYDVQVAIHTDTLNEGGFLEETLAAFKDRTIHTYHTEGAGGGHAPDILKAIGQSNVLPSSTNPTRPYTINTIDEHLDMLMVCHHLDPAIAEDIAFAESRIRRETIAAEDILQDLGAIVMMSSDSQAMGRVGEVILRTWQTAHKMKVQRGPLEGDNEFHDNNRIKRYIAKYTINPAITHGLSHEIGSVEVGKLADLVLWKPAFFGVKPSMIIKGGMIAAAPMGDINASIPTPQPVHYRPMFGAYPRGVHNTCITFLSQAAIDEKVAEKLNLKKLISPCKNTRSITKADMKHNTYCPVMQVHPETYEVRADGELLTCEPADVLPMAQRYFLF

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

FMT_C_6(1A5O)
URE1_KLEAE
[Raw transfer]




CAQ_C_12(5G4H)
?
[Raw transfer]




HQE_C_23(5FSE)
URE1_SPOPA
[Raw transfer]




61 HHSearch 90.0675% -69 - C2 -1A5O 3.2 URE1_KLEAE
6 PsiBlast_PDB 89.7974% -69 - C2 -1A5O - URE1_KLEAE -
1 PsiBlast_PDB 89.7975% -66 - C2 -1KRA - URE1_KLEAE -
5 PsiBlast_PDB 89.2974% -62 - C2 -1KRC - URE1_KLEAE -
2 PsiBlast_PDB 88.9474% -64 - C2 -1A5K - URE1_KLEAE -
3 PsiBlast_PDB 88.9074% -68 - C2 -1A5M - URE1_KLEAE -
4 PsiBlast_PDB 78.7474% -63 - C2 -1A5N - URE1_KLEAE -
56 HHSearch 76.7658% 10 - C2 -4Z42 - ? -
11 PsiBlast_PDB 76.7057% 11 - C2 -4Z42 - ? -
10 PsiBlast_PDB 70.8762% 4 - C2 -5G4H 3.1 ?
9 PsiBlast_PDB 70.8662% 4 - C2 -5FSE 3.0 URE1_SPOPA
8 PsiBlast_PDB 70.7262% 4 - C2 -5FSD - URE1_SPOPA -
7 PsiBlast_PDB 70.6762% 3 - C2 -5A6T - URE1_SPOPA -
74 HHSearch 35.7918% -18 - C2 -2OOF - HUTI_AERHH -
73 HHSearch 35.5018% -21 - C2 -2Q09 - HUTI_AERHH -
68 HHSearch 33.0719% 3 - C2 -4WGX - ? -
85 HHSearch 32.6216% -10 - C2 -3GRI - PYRC_STAAC -
86 HHSearch 32.1716% -8 - C2 -3GRI - PYRC_STAAC -
66 HHSearch 31.9818% 2 - C2 -4UB9 - ? -
77 HHSearch 31.0217% -12 - C2 -3G77 - CODA_ECOLI -