@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VSE0: (2017-12-07 )
MTQQNAQSTSEPTISENDLIAQRHAKLKQIQDVAKETGKSPWPNTFKREHYAADLQEQFKDQSKEQIESAEHVYVKVAGRVMLNRGSFMVIQDMTGRIQLYVDRKGLPKDTLETIKGLDLGDIIAAEGYIGRSGKGDLYVHLEGFELLTKSLRPLPDKFHGLNDTEVKYRKRYLDLIVNEETRKTFEIRAKVVAGIRAFLTNERFMEVETPMMHVIPGGASARPFETHHNALDMPLFLRIAPELYLKRLVVGGFERVFEINRNFRNEGVSTRHNPEFTMIEFYQAYADYKDLMALTENMLEKLALDILGTTDVPYQGEVFSFKGPFKKISMFDAILENNPQFTPENVGDREFLAKFVREELKEEVKPGFGLGKLQTIVFEETVETKLRQPTFITEYPAETSPLARRNDDNPHITDRFEFFIGGRELANGFSELNDPIDQAERFQAQVAEKDAGDDEAMHYDAEFVEALEYGLPPTAGEGIGIDRLVMLFADAPSIRDVILFPHMRRKEG

Atome Classification :

(27 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

LAD_B_2(1E1T)
SYK2_ECOLI
[Raw transfer]




KAA_C_7(3A5Y)
EPMA_ECOLI
[Raw transfer]




KAA_B_6(3A5Y)
EPMA_ECOLI
[Raw transfer]




ATP_A_3(1E24)
SYK2_ECOLI
[Raw transfer]




LAD_A_2(4UP7)
?
[Raw transfer]




AMP_B_7(3G1Z)
EPMA_SALTY
[Raw transfer]




ACP_A_3(1E22)
SYK2_ECOLI
[Raw transfer]




AMP_A_3(3G1Z)
EPMA_SALTY
[Raw transfer]




GOL_B_9(1E1T)
SYK2_ECOLI
[Raw transfer]




GOL_B_11(1E1O)
SYK2_ECOLI
[Raw transfer]




LYS_B_4(4EX5)
SYK_BURTA
[Raw transfer]




LYS_B_4(4EX5)
SYK_BURTA
[Raw transfer]




LYS_A_3(4EX5)
SYK_BURTA
[Raw transfer]




KRS_A_4(4YCU)
SYK_HUMAN
[Raw transfer]




KRS_A_4(4YCU)
SYK_HUMAN
[Raw transfer]




KRS_B_8(4YCU)
SYK_HUMAN
[Raw transfer]




LYS_B_3(1E1O)
SYK2_ECOLI
[Raw transfer]




LYS_B_3(1E1O)
SYK2_ECOLI
[Raw transfer]




LYS_C_3(1BBU)
SYK1_ECOLI
[Raw transfer]




LYS_C_3(1BBU)
SYK1_ECOLI
[Raw transfer]




76 Fugue 86.3357% 26 - C7 -1LYL - SYK2_ECOLI -
27 PsiBlast_CBE 85.5650% 11 - C7 -3E9H - SYK_GEOSE -
91 HHSearch 85.5258% 26 - C7 -1BBU 2.7 SYK1_ECOLI
9 PsiBlast_PDB 85.4550% 17 - C7 -3E9H - SYK_GEOSE -
29 PsiBlast_CBE 85.3050% 10 - C7 -3E9H - SYK_GEOSE -
86 HHSearch 85.2258% 25 - C7 -1E1O 3.3 SYK2_ECOLI
28 PsiBlast_CBE 85.1050% 16 - C7 -3E9H - SYK_GEOSE -
8 PsiBlast_PDB 85.0654% 17 - C7 -4EX5 3.1 SYK_BURTA
3 PsiBlast_PDB 84.9256% 37 - C7 -1LYL - SYK2_ECOLI -
1 PsiBlast_PDB 84.9156% 29 - C7 -1BBU 2.7 SYK1_ECOLI
10 PsiBlast_PDB 84.8950% 14 - C7 -3E9I - SYK_GEOSE -
26 PsiBlast_CBE 84.5650% 12 - C7 -3E9I - SYK_GEOSE -
30 PsiBlast_CBE 84.3650% 16 - C7 -3A74 - SYK_GEOSE -
4 PsiBlast_PDB 84.3356% 36 - C7 -1E1O 3.3 SYK2_ECOLI
21 PsiBlast_CBE 84.2856% 35 - C7 -1LYL - SYK2_ECOLI -
31 PsiBlast_CBE 84.2750% 15 - C7 -3A74 - SYK_GEOSE -
6 PsiBlast_PDB 84.2756% 36 - C7 -1E22 7.1 SYK2_ECOLI
11 PsiBlast_PDB 84.1950% 15 - C7 -3A74 - SYK_GEOSE -
25 PsiBlast_CBE 84.1750% 12 - C7 -3E9I - SYK_GEOSE -
23 PsiBlast_CBE 84.1554% 18 - C7 -4EX5 3.1 SYK_BURTA
5 PsiBlast_PDB 83.7056% 37 - C7 -1E1T 8.6 SYK2_ECOLI
7 PsiBlast_PDB 83.4956% 37 - C7 -1E24 7.0 SYK2_ECOLI
92 HHSearch 82.5855% 20 - C7 -4EX5 3.1 SYK_BURTA
99 HHSearch 76.9641% 31 - C7 -4UP7 7.5 ?
87 HHSearch 76.6439% 30 * C7 *4YCU 5.7 SYK_HUMAN
33 PsiBlast_CBE 74.9040% 37 - C7 -4YCU 6.3 SYK_HUMAN
13 PsiBlast_PDB 74.2140% 38 - C7 -4YCU 5.7 SYK_HUMAN