@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VSK2: (2017-12-08 )
MSEATGKKAVLHLDGKEIELPIYSGTLGPDVIDVKDVLASGHFTFDPGFMATASCESKITFIDGDKGILLHRGYPIDQLATQADYLETCYLLLNGELPTAEQKVEFDAKVRAHTMVHDQVSRFFNGFRRDAHPMAIMVGVVGALSAFYHNNLDIEDINHREITAIRLIAKIPTLAAWSYKYTVGQPFIYPRNDLNYAENFLHMMFATPADRDYKVNPVLARAMDRIFTLHADHEQNASTSTVRLAGSTGANPYACISAGISALWGPAHGGANEAVLKMLDEIGSVENVAEFMEKVKRKEVKLMGFGHRVYKNFDPRAKVMKQTCDEVLEALGINDPQLALAMELERIALNDPYFVERKLYPNVDFYSGIILKAIGIPTEMFTVIFALARTVGWISHWLEMHSGPYKIGRPRQLYTGEVQRDIKR

Atome Classification :

(31 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

COA_C_3(1A59)
PRPC_ABDS2
[Raw transfer]



COA_C_3(1A59)
PRPC_ABDS2
[Raw transfer]



COA_D_4(1AJ8)
CISY_PYRFU
[Raw transfer]



CIT_E_5(1AJ8)
CISY_PYRFU
[Raw transfer]



CIT_E_5(1AJ8)
CISY_PYRFU
[Raw transfer]



CIT_E_5(1AJ8)
CISY_PYRFU
[Raw transfer]



CIT_F_6(1AJ8)
CISY_PYRFU
[Raw transfer]



CIT_F_6(1AJ8)
CISY_PYRFU
[Raw transfer]



GOL_D_4(1VGM)
?
[Raw transfer]



GOL_D_4(1VGM)
?
[Raw transfer]



GOL_A_4(1IOM)
?
[Raw transfer]



GOL_A_4(1IOM)
?
[Raw transfer]
27 PsiBlast_CBE 95.5767% 0 - C- -1OWB - CISY_ECOLI -
7 PsiBlast_PDB 95.5767% 0 - C- -1OWB - CISY_ECOLI -
76 HHSearch 85.8369% -45 - C8 -2H12 - CISY_ACEAC -
6 PsiBlast_PDB 85.5769% -41 - C8 -4E6Y - ? -
11 PsiBlast_PDB 83.3068% -9 - C8 -2H12 - CISY_ACEAC -
8 PsiBlast_PDB 81.6267% -42 - C8 -1OWC - CISY_ECOLI -
35 PsiBlast_CBE 81.0755% -84 - C8 -3MSU - ? -
3 PsiBlast_PDB 81.0768% -37 - C8 -4JAF - CISY_ECOLI -
2 PsiBlast_PDB 80.2268% -38 - C8 -4JAE - CISY_ECOLI -
12 PsiBlast_PDB 80.0155%-105 - C8 -3MSU - ? -
4 PsiBlast_PDB 79.9168% -33 - C8 -4JAG - CISY_ECOLI -
1 PsiBlast_PDB 79.9068% -34 - C8 -4JAD - CISY_ECOLI -
5 PsiBlast_PDB 79.5768% -46 - C8 -4G6B - CISY_ECOLI -
22 PsiBlast_CBE 79.5368% -35 - C8 -4JAF - CISY_ECOLI -
23 PsiBlast_CBE 78.2468% -34 - C8 -4JAE - CISY_ECOLI -
10 PsiBlast_PDB 78.2467% -47 - C8 -1NXG - CISY_ECOLI -
9 PsiBlast_PDB 78.1567% -45 - C8 -1NXE - CISY_ECOLI -
28 PsiBlast_CBE 77.5467% -45 - C8 -1NXG - CISY_ECOLI -
78 HHSearch 76.4755% -11 - C8 -3MSU - ? -
79 HHSearch 74.8455% -17 - C8 -3MSU - ? -
95 HHSearch 72.5736% -87 - C8 -1VGM 2.2 ?
86 HHSearch 70.5133%-128 - C8 -1AJ8 3.5 CISY_PYRFU
16 PsiBlast_PDB 70.3037% -56 - C8 -1VGM 2.2 ?
88 HHSearch 70.0236%-121 - C8 -1IOM 3.1 ?
87 HHSearch 69.9533%-126 - C8 -1AJ8 3.0 CISY_PYRFU
17 PsiBlast_PDB 66.5637% -86 - C8 -1IOM 3.1 ?
98 Fugue 66.0033% -70 - C8 -1AJ8 3.0 CISY_PYRFU
81 HHSearch 63.2233% -46 - C8 -1A59 7.0 PRPC_ABDS2
40 PsiBlast_CBE 62.6034% -47 - C8 -1AJ8 7.6 CISY_PYRFU
45 PsiBlast_CBE 62.2632% -52 - C8 -1A59 7.1 PRPC_ABDS2
20 PsiBlast_PDB 62.0634% -46 - C8 -1AJ8 3.0 CISY_PYRFU