@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VSK5: (2017-12-08 )
MGAINPKEDYSNIQNLTFDAVIVGGGGSGMRASYQLAQAGLKVAVLTKVFPTRSHTVAAQGGIGASLGNMQEDNWHFHFYDTVKGSDWLGDQDAIEFMCREAPKVVYELEHLGMPFDRNADGTIYQRPFGGHSANYGDKPVPRACAAADRTGHALLHTLYQSNVKMGTQFFVEWIALDLIRNEAGDVLGVTAIDQETGNIAVFQAKATLFATGGAGRVYRASTNAYINTGDGLGMAARAGIPLQDMEFWQFHPTGVAGAGVLLTEGCRGEGAILRNKDGEPFMERYAPTLKDLAPRDFVSRSMDQEIKEGRGCGPKGDYILLDMTHLGADTIMKRLPSVFEIGKKFANVDITKEPIPVVPTIHYQMGGIPTNMHGQVCLPEPGTDNYTKPVKGFYAIGECSCVSVHGANRLGTNSLLDLVVFGKAAGEHIIDYVTKHHGDEYAPLPTNVLEQTLARVRKLDESTSGENAQEVADAIRDIVQDHAGVFRTQALLDKGVKEILALEPRVRNIHLKDKSKVFNTARVEALEVENLYEVAKATLISAAARKECRGAHTVVDYELPADHPTYSYGRRDYEWMKHTLWYSSDNRLEYKPVRFKPLTVDPIPPAPRTF

Atome Classification :

(49 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

FAD_A_5(3SFD)
SDHA_PIG
[Raw transfer]




FAD_A_5(3AEF)
SDHA_PIG
[Raw transfer]




FAD_A_5(3AE6)
SDHA_PIG
[Raw transfer]




FAD_A_5(3AEE)
SDHA_PIG
[Raw transfer]




FAD_A_5(1ZOY)
SDHA_PIG
[Raw transfer]




FAD_A_6(1YQ3)
SDHA_CHICK
[Raw transfer]




FAD_A_6(1YQ3)
SDHA_CHICK
[Raw transfer]




FAD_A_5(3AED)
SDHA_PIG
[Raw transfer]




FAD_A_5(3AE2)
SDHA_PIG
[Raw transfer]




FAD_A_5(3AEA)
SDHA_PIG
[Raw transfer]




FAD_A_5(3SFE)
SDHA_PIG
[Raw transfer]




FAD_A_5(1ZP0)
SDHA_PIG
[Raw transfer]




FAD_A_5(3AE9)
SDHA_PIG
[Raw transfer]




FAD_A_5(3AEB)
SDHA_PIG
[Raw transfer]




FAD_A_5(3AE3)
SDHA_PIG
[Raw transfer]




FAD_A_6(1YQ4)
SDHA_CHICK
[Raw transfer]




FAD_A_5(3AEC)
SDHA_PIG
[Raw transfer]




FAD_A_5(3AE1)
SDHA_PIG
[Raw transfer]




FAD_A_5(3AE8)
SDHA_PIG
[Raw transfer]




FAD_A_5(3AE7)
SDHA_PIG
[Raw transfer]




FAD_A_5(3AE4)
SDHA_PIG
[Raw transfer]




FAD_A_5(3ABV)
SDHA_PIG
[Raw transfer]




FAD_A_5(3AEG)
SDHA_PIG
[Raw transfer]




FAD_A_5(3AE5)
SDHA_PIG
[Raw transfer]




FAD_A_5(4YXD)
SDHA_PIG
[Raw transfer]




FAD_A_8(1NEK)
SDHA_ECOLI
[Raw transfer]




FAD_A_5(4YTP)
SDHA_PIG
[Raw transfer]




FAD_A_6(2H89)
SDHA_CHICK
[Raw transfer]




FAD_A_6(2ACZ)
SDHA_ECOLI
[Raw transfer]




FAD_A_8(1NEN)
SDHA_ECOLI
[Raw transfer]




3NP_A_10(1ZP0)
SDHA_PIG
[Raw transfer]




SIN_A_2(5GLG)
?
[Raw transfer]




3NP_A_11(1YQ4)
SDHA_CHICK
[Raw transfer]




ASP_A_11(5KXJ)
NADB_SALTY
[Raw transfer]




102 HHSearch 97.9251% 0 - C- -2H88 - SDHA_CHICK -
103 HHSearch 93.8151% -26 - C1 -1YQ3 12.4 SDHA_CHICK
29 PsiBlast_CBE 93.5652% -26 - C1 -2WDV - SDHA_ECOLI -
10 PsiBlast_PDB 93.2552% -24 - C1 -2WU5 - SDHA_ECOLI -
5 PsiBlast_PDB 93.0152% -27 - C1 -2WDV - SDHA_ECOLI -
26 PsiBlast_CBE 92.9652% -25 - C1 -2WS3 - SDHA_ECOLI -
33 PsiBlast_CBE 92.9152% -24 - C1 -2WDQ - SDHA_ECOLI -
21 PsiBlast_CBE 92.8652% -24 - C1 -2WU5 - SDHA_ECOLI -
22 PsiBlast_CBE 92.7852% -24 - C1 -2WU5 - SDHA_ECOLI -
54 PsiBlast_CBE 92.6250% 0 - C- -2FBW - SDHA_CHICK -
53 PsiBlast_CBE 92.6250% 0 - C- -2FBW - SDHA_CHICK -
52 PsiBlast_CBE 92.6250% 0 - C- -2H88 - SDHA_CHICK -
51 PsiBlast_CBE 92.6250% 0 - C- -2H88 - SDHA_CHICK -
104 HHSearch 92.5652% -24 - C1 -2WDQ - SDHA_ECOLI -
30 PsiBlast_CBE 92.4552% -26 - C1 -2WDV - SDHA_ECOLI -
9 PsiBlast_PDB 92.3752% -24 - C1 -2WU2 - SDHA_ECOLI -
4 PsiBlast_PDB 92.3352% -24 - C1 -2WDQ - SDHA_ECOLI -
34 PsiBlast_CBE 92.1552% -24 - C1 -2WDQ - SDHA_ECOLI -
24 PsiBlast_CBE 92.0752% -23 - C1 -2WU2 - SDHA_ECOLI -
27 PsiBlast_CBE 91.8352% -22 - C1 -2WP9 - SDHA_ECOLI -
37 PsiBlast_CBE 89.7850% -23 - C1 -3AEG 11.4 SDHA_PIG
16 PsiBlast_PDB 89.1850% -19 - C1 -3AE1 11.0 SDHA_PIG
18 PsiBlast_PDB 89.1150% -20 - C1 -3AE3 9.6 SDHA_PIG
11 PsiBlast_PDB 88.9950% -22 - C1 -4YTP 11.6 SDHA_PIG
44 PsiBlast_CBE 88.7850% -22 - C1 -3AE9 10.9 SDHA_PIG
46 PsiBlast_CBE 88.6750% -19 - C1 -3AE7 9.5 SDHA_PIG
15 PsiBlast_PDB 88.6450% -22 - C1 -3ABV 10.7 SDHA_PIG
47 PsiBlast_CBE 88.6050% -23 - C1 -3AE6 9.7 SDHA_PIG
17 PsiBlast_PDB 88.5650% -22 - C1 -3AE2 11.4 SDHA_PIG
19 PsiBlast_PDB 88.2750% -20 - C1 -3AE4 10.1 SDHA_PIG
35 PsiBlast_CBE 87.9450% -18 - C1 -3SFE 11.5 SDHA_PIG
42 PsiBlast_CBE 87.8250% -19 - C1 -3AEB 10.9 SDHA_PIG
40 PsiBlast_CBE 87.7650% -20 - C1 -3AED 9.7 SDHA_PIG
41 PsiBlast_CBE 87.6550% -18 - C1 -3AEC 8.8 SDHA_PIG
20 PsiBlast_PDB 87.5250% -21 - C1 -3AE5 10.4 SDHA_PIG
45 PsiBlast_CBE 87.4650% -19 - C1 -3AE8 9.9 SDHA_PIG
55 PsiBlast_CBE 87.4550% -18 - C1 -1YQ4 10.3 SDHA_CHICK
39 PsiBlast_CBE 87.0950% -20 - C1 -3AEE 10.3 SDHA_PIG
36 PsiBlast_CBE 87.0150% -18 - C1 -3SFD 10.8 SDHA_PIG
13 PsiBlast_PDB 87.0150% -22 - C1 -1ZOY 10.0 SDHA_PIG
14 PsiBlast_PDB 86.7950% -21 - C1 -1ZP0 10.7 SDHA_PIG
38 PsiBlast_CBE 86.6250% -18 - C1 -3AEF 10.7 SDHA_PIG
2 PsiBlast_PDB 86.5952% -16 - C1 -1NEN 11.7 SDHA_ECOLI
43 PsiBlast_CBE 86.5350% -21 - C1 -3AEA 10.1 SDHA_PIG
56 PsiBlast_CBE 86.0350% -17 - C1 -1YQ3 10.7 SDHA_CHICK
12 PsiBlast_PDB 85.8950% -22 - C1 -4YXD 11.5 SDHA_PIG
1 PsiBlast_PDB 85.4352% -15 - C1 -1NEK 11.7 SDHA_ECOLI
3 PsiBlast_PDB 85.1852% -17 - C1 -2ACZ 11.5 SDHA_ECOLI
50 PsiBlast_CBE 83.7550% -16 - C1 -2H89 11.0 SDHA_CHICK