@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VSM5: (2017-12-09 )
MSDYFKNAVLWLIILGVLILIFSNISDRNKPTAMKYSDFIAAVNAGQIKQVTIDGLNISGEKTNGSQFETVRPQVEDTELMPSLNKQNVVVEGTAPQRQGILMQLLIASFPVLLIILLFMFFMRNMGGGAGGKNGPMSFGKSKAKMLSEDQIKVTFADVAGCDEAKQEVVEIVDFLKDPAKFKRLGATIPRGVLMVGPPGTGKTLLAKAIAGEAKVPFFSISGSDFVEMFVGVGASRVRDMFEQAKRHAPCIIFIDEIDAVGRHRGSGTGGGHDEREQTLNQMLVEMDGFEGNEGVIVIAATNRVDVLDKALLRPGRFDRQVMVGLPDIRGREQILNVHLKKLPSVTGIDVKVLSRGTPGFSGAQLANLVNEAALFAARRNKNTVDMHDFEDAKDKIYMGPERKSMVLREEERRATAYHEAGHAIVAEILPGTDPVHKVTIMPRGWALGVTWQLPEQDQISHYKDKMLNEIAILFGGRIAEEVFIQQQSTGASNDFERATKMARAMVTKYGMSDKMGVMVYEDENQNGFFGNVGSRTISEATQQQVDQEVRRILDEQYKVARDILENNKDIALAMVKALMEWETIDRDQIRDIMEGREPQPPKVYIAENPVSAFEPPKDGPSTPPPLPAMN

Atome Classification :

(34 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ADP_A_2(5EQT)
PAN_PYRHO
[Raw transfer]



ADP_A_5(4WW0)
FTSH_AQUAE
[Raw transfer]



ADP_C_8(2R65)
FTSH_HELPY
[Raw transfer]



ADP_B_7(4WW0)
FTSH_AQUAE
[Raw transfer]



ADP_B_5(3H4M)
PAN_METJA
[Raw transfer]



ADP_C_6(3H4M)
PAN_METJA
[Raw transfer]



ADP_C_9(4WW0)
FTSH_AQUAE
[Raw transfer]



ADP_E_10(2R65)
FTSH_HELPY
[Raw transfer]



ADP_A_2(2QZ4)

[Raw transfer]



ADP_A_6(2R65)
FTSH_HELPY
[Raw transfer]



ADP_B_7(2R65)
FTSH_HELPY
[Raw transfer]



ADP_A_4(3H4M)
PAN_METJA
[Raw transfer]



ADP_D_9(2R65)
FTSH_HELPY
[Raw transfer]



ADP_B_4(3D8B)

[Raw transfer]



ADP_A_3(3D8B)
FIGL1_HUMAN
[Raw transfer]



ANP_B_2(1IY0)
FTSH_THET8
[Raw transfer]



ADP_B_2(1IY1)
FTSH_THET8
[Raw transfer]
153 Fugue 90.0352%-111 - C3 -2CE7 - FTSH_THEMA -
121 HHSearch 87.3353%-103 - C3 -2DHR - FTSH_THET8 -
4 PsiBlast_PDB 86.5754% -82 - C3 -4WW0 8.4 FTSH_AQUAE
33 PsiBlast_CBE 85.9352% -68 - C3 -4EIW - FTSH_THET8 -
3 PsiBlast_PDB 85.7352% -68 - C3 -4EIW - FTSH_THET8 -
35 PsiBlast_CBE 85.3752% -66 - C3 -4EIW - FTSH_THET8 -
37 PsiBlast_CBE 85.1254% -75 - C3 -4Z8X - FTSH_AQUAE -
120 HHSearch 85.0953% -67 - C3 -3KDS - FTSH_THEMA -
1 PsiBlast_PDB 84.7453% -70 - C3 -3KDS - FTSH_THEMA -
5 PsiBlast_PDB 84.4454% -74 - C3 -4Z8X - FTSH_AQUAE -
122 HHSearch 84.4153% -71 - C3 -2CE7 - FTSH_THEMA -
28 PsiBlast_CBE 84.1952% -71 - C3 -2DHR - FTSH_THET8 -
2 PsiBlast_PDB 84.1152% -69 - C3 -2DHR - FTSH_THET8 -
30 PsiBlast_CBE 84.1052% -71 - C3 -2DHR - FTSH_THET8 -
39 PsiBlast_CBE 83.9254% -81 - C3 -4WW0 8.0 FTSH_AQUAE
40 PsiBlast_CBE 82.6554% -77 - C3 -4WW0 8.3 FTSH_AQUAE
31 PsiBlast_CBE 80.6752% -62 - C3 -2DHR - FTSH_THET8 -
27 PsiBlast_CBE 80.5652% -60 - C3 -2DHR - FTSH_THET8 -
29 PsiBlast_CBE 80.4652% -61 - C3 -2DHR - FTSH_THET8 -
6 PsiBlast_PDB 77.7580%-119 - C3 -1LV7 - FTSH_ECOLI -
10 PsiBlast_PDB 72.1966%-121 - C3 -1IY1 5.3 FTSH_THET8
9 PsiBlast_PDB 71.8466%-123 - C3 -1IY0 5.5 FTSH_THET8
13 PsiBlast_PDB 61.6152%-113 - C3 -2QZ4 8.3
12 PsiBlast_PDB 60.5758% -65 - C3 -2R65 6.4 FTSH_HELPY
41 PsiBlast_CBE 59.3758% -55 - C3 -2R65 5.5 FTSH_HELPY
42 PsiBlast_CBE 59.3358% -62 - C3 -2R65 5.2 FTSH_HELPY
44 PsiBlast_CBE 59.1158% -58 - C3 -2R65 5.6 FTSH_HELPY
43 PsiBlast_CBE 57.9958% -48 - C3 -2R65 7.1 FTSH_HELPY
14 PsiBlast_PDB 53.8047% 14 - C3 -5EQT 7.7 PAN_PYRHO
15 PsiBlast_PDB 53.4244% -0 - C3 -3H4M 7.5 PAN_METJA
46 PsiBlast_CBE 52.9444% -1 - C3 -3H4M 7.1 PAN_METJA
134 HHSearch 50.3434% -23 - C3 -3D8B 8.3 FIGL1_HUMAN
45 PsiBlast_CBE 49.9944% 10 - C3 -3H4M 6.4 PAN_METJA
133 HHSearch 49.3734% -14 - C3 -3D8B 8.0