@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VSN4: (2017-12-09 )
MCVENERDIQMSNCPKKYIVAFDQGTTSSRAIVLDHDANVVSIAQREFTQIYPQPGWVEHDPMEIWATQSAVWVEALAQAGIKSEQVAAIGITNQRETTIVWDKKTGRPIYNAIVWQSRQTTEICNQLYKAGWQEYIRKTTGLVIDPYFSATKIKWILDHVEGSRERAERGELLFGTVDTWLIWKLTNGAVHVTDFTNASRTMLFDIEKLEWDEKLLQALGIPRAMLPEVRSSSEVYGYTHTISGQEVGIPIAGIAGDQQAALFGQMCVESGQAKNTYGTGCFLLMNTGKKIVRSEHGLLTTIACGASGEVNYALEGAVFNGGSCVQWLRDVLKVIKNAKDSELYATRVKDNNGVYVVPAFTGLGAPYWDPTARGAIFGLTRGASIEHIIRATLESIAFQTRDVLDAMQQDAEEELRTLRVDGGVTENNFLMQFQADILTTPVERPIMKETTALGAAFLAGLATGFWQDLHELRNKSAIEKVFEPKMPSEQAELIYKGWLKAVKRSQNWAED

Atome Classification :

(40 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATS_Y_4(1GLJ)
GLPK_ECOLI
[Raw transfer]




ADP_G_6(1GLE)
GLPK_ECOLI
[Raw transfer]




ADP_G_6(1GLC)
GLPK_ECOLI
[Raw transfer]




ADP_G_9(1GLB)
GLPK_ECOLI
[Raw transfer]




ADP_G_5(1GLD)
GLPK_ECOLI
[Raw transfer]




ATS_O_5(1GLJ)
GLPK_ECOLI
[Raw transfer]




ATF_Y_5(1BWF)
GLPK_ECOLI
[Raw transfer]




ACP_Y_5(1GLL)
GLPK_ECOLI
[Raw transfer]




ACP_O_6(1GLL)
GLPK_ECOLI
[Raw transfer]




ATF_O_6(1BWF)
GLPK_ECOLI
[Raw transfer]




GOL_Z_5(1BO5)
GLPK_ECOLI
[Raw transfer]




GOL_I_9(1BOT)
GLPK_ECOLI
[Raw transfer]




GOL_G_9(1GLA)
GLPK_ECOLI
[Raw transfer]




GOL_O_4(1BO5)
GLPK_ECOLI
[Raw transfer]




GOL_O_7(3H46)
GLPK_ENTCA
[Raw transfer]




GOL_O_3(3D7E)
GLPK_ENTCA
[Raw transfer]




GOL_G_7(1BOT)
GLPK_ECOLI
[Raw transfer]




GOL_X_5(3FLC)
GLPK_ENTCA
[Raw transfer]




GOL_O_3(3FLC)
GLPK_ENTCA
[Raw transfer]




GOL_O_8(3H3N)
GLPK_ENTCA
[Raw transfer]




GOL_X_4(3H46)
GLPK_ENTCA
[Raw transfer]




GOL_X_4(3D7E)
GLPK_ENTCA
[Raw transfer]




GOL_X_3(3H3N)
GLPK_ENTCA
[Raw transfer]




GOL_D_4(1XUP)
GLPK_ENTCA
[Raw transfer]




GOL_C_3(1XUP)
GLPK_ENTCA
[Raw transfer]




EDO_O_10(3H3N)
GLPK_ENTCA
[Raw transfer]




EDO_B_21(2W41)
?
[Raw transfer]




MPD_C_3(2D4W)
?
[Raw transfer]




MPD_D_4(2D4W)
?
[Raw transfer]




26 PsiBlast_CBE 97.8571% -87 - C2 -3EZW - GLPK_ECOLI -
27 PsiBlast_CBE 97.7371% -85 - C2 -3EZW - GLPK_ECOLI -
33 PsiBlast_CBE 97.1571% -80 - C2 -1BU6 - GLPK_ECOLI -
9 PsiBlast_PDB 97.1471% -78 - C2 -3EZW - GLPK_ECOLI -
29 PsiBlast_CBE 97.0471% -83 - C2 -3EZW - GLPK_ECOLI -
32 PsiBlast_CBE 96.9771% -83 - C2 -1BU6 - GLPK_ECOLI -
22 PsiBlast_CBE 96.7271% -79 - C2 -1GLF - GLPK_ECOLI -
37 PsiBlast_CBE 96.3971% -85 - C2 -1BWF 5.7 GLPK_ECOLI
10 PsiBlast_PDB 96.3771% -80 - C2 -1BU6 - GLPK_ECOLI -
34 PsiBlast_CBE 96.2871% -82 - C2 -1BU6 - GLPK_ECOLI -
6 PsiBlast_PDB 96.2571% -78 - C2 -1GLF - GLPK_ECOLI -
12 PsiBlast_PDB 96.0671% -84 - C2 -1GLJ 6.6 GLPK_ECOLI
25 PsiBlast_CBE 96.0571% -79 - C2 -1BO5 2.7 GLPK_ECOLI
23 PsiBlast_CBE 96.0271% -78 - C2 -1GLF - GLPK_ECOLI -
8 PsiBlast_PDB 95.8071% -77 - C2 -1BO5 4.1 GLPK_ECOLI
24 PsiBlast_CBE 95.5871% -81 - C2 -1BOT 4.6 GLPK_ECOLI
21 PsiBlast_CBE 95.2871% -76 - C2 -1GLF - GLPK_ECOLI -
36 PsiBlast_CBE 95.2671% -86 - C2 -1GLJ 6.4 GLPK_ECOLI
7 PsiBlast_PDB 95.1571% -79 - C2 -1BOT 4.1 GLPK_ECOLI
4 PsiBlast_PDB 95.1471% -83 - C2 -1GLD 6.0 GLPK_ECOLI
35 PsiBlast_CBE 95.0671% -86 - C2 -1GLL 5.3 GLPK_ECOLI
2 PsiBlast_PDB 94.8971% -83 - C2 -1GLB 5.5 GLPK_ECOLI
13 PsiBlast_PDB 94.8471% -82 - C2 -1GLL 6.1 GLPK_ECOLI
11 PsiBlast_PDB 94.8371% -81 - C2 -1BWF 5.5 GLPK_ECOLI
3 PsiBlast_PDB 94.8071% -80 - C2 -1GLC 5.1 GLPK_ECOLI
1 PsiBlast_PDB 94.6871% -80 - C2 -1GLA 2.4 GLPK_ECOLI
5 PsiBlast_PDB 93.7671% -81 - C2 -1GLE 5.3 GLPK_ECOLI
49 PsiBlast_CBE 91.0056% -72 - C2 -3H3N 3.5 GLPK_ENTCA
40 PsiBlast_CBE 90.9956% -72 - C2 -3H46 3.6 GLPK_ENTCA
19 PsiBlast_PDB 90.6156% -72 - C2 -3H46 3.7 GLPK_ENTCA
48 PsiBlast_CBE 90.6056% -74 - C2 -3H3N 3.4 GLPK_ENTCA
39 PsiBlast_CBE 89.8956% -73 - C2 -3D7E 3.3 GLPK_ENTCA
17 PsiBlast_PDB 89.7656% -75 - C2 -3D7E 3.6 GLPK_ENTCA
38 PsiBlast_CBE 89.7256% -69 - C2 -3FLC 3.6 GLPK_ENTCA
16 PsiBlast_PDB 89.1156% -73 - C2 -3FLC 3.5 GLPK_ENTCA
53 PsiBlast_CBE 80.7953% -19 - C2 -2D4W 3.9 ?
51 PsiBlast_CBE 80.2856% -61 - C2 -1XUP 2.5 GLPK_ENTCA
52 PsiBlast_CBE 79.4153% -16 - C2 -2D4W 3.2 ?
50 PsiBlast_CBE 78.8656% -58 - C2 -1XUP 3.1 GLPK_ENTCA
78 PsiBlast_CBE 67.1239% 12 - C2 -2W41 2.5 ?