@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VSP6: (2017-12-09 )
MDSYSPYKGKSGLKRILNATSYSISGFKAAYQNEAAFRQIVLINLVLIPVSFFLDVTRGEHALMIIVCLFAIIVELFNSTIEAVVDRVSLEKHQLSKNAKDMGSAAQFVALSIIVATWLIILFG

Atome Classification :

(23 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ACP_C_17(4UXX)
KDGL_ECOLI
[Raw transfer]



ACP_C_8(4CK0)
KDGL_ECOLI
[Raw transfer]



78N_B_12(3ZE3)
KDGL_ECOLI
[Raw transfer]



OLC_C_12(4UXW)
KDGL_ECOLI
[Raw transfer]



78N_B_12(4D2E)
KDGL_ECOLI
[Raw transfer]



79M_B_10(4UYO)
KDGL_ECOLI
[Raw transfer]



79M_B_14(4UXZ)
KDGL_ECOLI
[Raw transfer]



OLC_B_11(4UXX)
KDGL_ECOLI
[Raw transfer]



78M_D_19(3ZE3)
KDGL_ECOLI
[Raw transfer]



MPD_B_10(4UXX)
KDGL_ECOLI
[Raw transfer]



78M_D_11(4BPD)
KDGL_ECOLI
[Raw transfer]



MPD_B_6(4UXW)
KDGL_ECOLI
[Raw transfer]



CIT_C_21(5DWK)
KDGL_ECOLI
[Raw transfer]
2 PsiBlast_PDB 88.5046% - - C8 -3ZE4 - KDGL_ECOLI -
4 PsiBlast_PDB 84.0446% - - C8 -3ZE5 - KDGL_ECOLI -
23 PsiBlast_CBE 66.4246%-175 - C8 -4UXW - KDGL_ECOLI -
30 PsiBlast_CBE 66.3846%-216 - C8 -5DWK - KDGL_ECOLI -
11 PsiBlast_PDB 66.2246%-216 - C8 -4BPD - KDGL_ECOLI -
27 PsiBlast_CBE 66.0346%-179 - C8 -4CJZ - KDGL_ECOLI -
21 PsiBlast_CBE 65.8746%-168 - C8 -4UXX 3.9 KDGL_ECOLI
8 PsiBlast_PDB 65.6046%-168 - C8 -4UXX - KDGL_ECOLI -
6 PsiBlast_PDB 65.5246%-171 - C8 -4CK0 - KDGL_ECOLI -
9 PsiBlast_PDB 65.3246%-179 - C8 -5D6I - KDGL_ECOLI -
14 PsiBlast_PDB 65.1246%-208 - C8 -4D2E - KDGL_ECOLI -
18 PsiBlast_PDB 65.0046%-208 - C8 -5D57 - KDGL_ECOLI -
10 PsiBlast_PDB 64.9546%-206 - C8 -3ZE3 - KDGL_ECOLI -
15 PsiBlast_PDB 64.8346%-198 - C8 -4UXZ - KDGL_ECOLI -
13 PsiBlast_PDB 64.7646%-204 - C8 -4BRR - KDGL_ECOLI -
3 PsiBlast_PDB 64.6546%-169 - C8 -4UP6 - KDGL_ECOLI -
5 PsiBlast_PDB 64.2946%-178 - C8 -4CJZ - KDGL_ECOLI -
12 PsiBlast_PDB 64.2146%-196 - C8 -4BRB - KDGL_ECOLI -
22 PsiBlast_CBE 64.1646%-175 - C8 -4UXW 3.8 KDGL_ECOLI
7 PsiBlast_PDB 63.8346%-179 - C8 -4UXW - KDGL_ECOLI -
20 PsiBlast_CBE 62.6446%-184 - C8 -4UXX 4.5 KDGL_ECOLI
24 PsiBlast_CBE 61.9046%-178 - C8 -4CK0 4.2 KDGL_ECOLI
29 PsiBlast_CBE 61.5146%-170 - C8 -5DWK 2.4 KDGL_ECOLI