@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VT30: (2017-12-11 )
MLLEFTKMHGLGNDFMVVDLISQRAYLDTATIQRLADRHFGVGFDQLLIVEPPDVPEADFKYRIFNADGSEVEQCGNGVRCFARFVHERHLTNKTNITVQTKAGIVKPELGQNGWVRVNMGYPKFLPNEIPFVADEPEALYTLELANDQNISIDVVNMGNPHAVTIVPDVLTADVAGIGPQVESHKRFPERINAGFMQVIDDKHVRLRVFERCVGETLACGTGACAAAVSGMRRGLLANSVEVELAGGKLQIEWQEGDVVWMTGPTTHVYDGRLDLRYFQG

Atome Classification :

(22 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ZDP_A_2(2GKE)
DAPF_HAEIN
[Raw transfer]



ZDP_A_2(2GKE)
DAPF_HAEIN
[Raw transfer]



ZDR_A_2(2GKJ)
DAPF_HAEIN
[Raw transfer]



API_A_2(5M47)
DAPF_CORGL
[Raw transfer]



TLA_A_2(2Q9H)
DAPF_HAEIN
[Raw transfer]



TLA_A_2(2Q9H)
DAPF_HAEIN
[Raw transfer]



EDO_A_3(2Q9J)
DAPF_HAEIN
[Raw transfer]



DTT_A_2(3FVE)
DAPF_MYCTU
[Raw transfer]



DTT_A_2(3FVE)
DAPF_MYCTU
[Raw transfer]
1 PsiBlast_PDB 95.0198%-119 - C4 -5HA4 - DAPF_ACIB3 -
45 HHSearch 88.2297% -56 * C4 *5HA4 - DAPF_ACIB3 -
44 HHSearch 87.2697% -58 - C4 -5HA4 - DAPF_ACIB3 -
2 PsiBlast_PDB 83.5358%-134 - C4 -4IJZ - DAPF_ECOLI -
3 PsiBlast_PDB 82.7357%-131 - C4 -4IK0 - DAPF_ECOLI -
9 PsiBlast_PDB 81.1854%-117 - C4 -2Q9J 2.5 DAPF_HAEIN
7 PsiBlast_PDB 81.1055%-122 - C4 -1BWZ - DAPF_HAEIN -
5 PsiBlast_PDB 81.0755%-105 - C4 -2GKE 5.2 DAPF_HAEIN
8 PsiBlast_PDB 80.9354%-114 - C4 -2Q9H 3.5 DAPF_HAEIN
6 PsiBlast_PDB 80.8255%-107 - C4 -2GKJ 4.1 DAPF_HAEIN
46 HHSearch 71.1053% -43 - C4 -2GKE 4.3 DAPF_HAEIN
4 PsiBlast_PDB 68.3555% - - C4 -1GQZ - DAPF_HAEIN -
47 HHSearch 65.1151% -11 - C4 -2Q9H 3.5 DAPF_HAEIN
11 PsiBlast_PDB 62.7142% -12 - C4 -3EKM - DAPF_ARATH -
27 PsiBlast_CBE 62.4642% -13 - C4 -3EKM - DAPF_ARATH -
26 PsiBlast_CBE 62.2542% -14 - C4 -3EKM - DAPF_ARATH -
33 PsiBlast_CBE 62.2042% -10 - C4 -3EJX - DAPF_ARATH -
32 PsiBlast_CBE 62.1842% -10 - C4 -3EJX - DAPF_ARATH -
28 PsiBlast_CBE 62.1142% -12 - C4 -3EKM - DAPF_ARATH -
24 PsiBlast_CBE 62.1042% -14 - C4 -3EKM - DAPF_ARATH -
13 PsiBlast_PDB 57.0130% -29 - C4 -5M47 4.9 DAPF_CORGL
48 HHSearch 53.9630% -14 - C4 -3FVE 2.0 DAPF_MYCTU