@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VT38: (2017-12-11 )
MSILVIADHNNQTLNGATLNVVAAAQKIGGDITVLVAGSGAQAVADAAAKVAGVSKVLLADNAAYANQLAENVAGLVADLAKGYKYVLAASTTTGKNILPRVAALLDVSMITDIISVESANTFKRPIYAGNAIATVQSDEAIIVGTVRGTAFDPVAAEGGSAAVETVGEVKDAGVSKFVSEEIVKLDRPELTAARIVVSGGRGVGSGENYHKVLDPLADKLGAAQGASRAAVDAGFVPNDFQVGQTGKIVAPELYIAVGISGAIQHLAGMKDSKVIVAINKDEEAPINSVADYWLVGDLNAVVPELVSKL

Atome Classification :

(22 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

FAD_A_5(1EFP)
ETFA_PARDE
[Raw transfer]



FAD_A_5(1EFP)
ETFA_PARDE
[Raw transfer]



FAD_A_5(1EFP)
ETFA_PARDE
[Raw transfer]



FAD_C_7(1EFP)
ETFA_PARDE
[Raw transfer]



FAD_C_3(1EFV)
ETFA_HUMAN
[Raw transfer]



FAD_C_3(1EFV)
ETFA_HUMAN
[Raw transfer]



FAD_A_3(2A1U)
ETFA_HUMAN
[Raw transfer]



FAD_A_3(4L2I)
?
[Raw transfer]



FAD_A_3(4KPU)
?
[Raw transfer]
5 PsiBlast_PDB 93.4158%-113 - C3 -1EFP 12.3 ETFA_PARDE
18 PsiBlast_CBE 92.5958%-111 - C3 -1EFP 12.2 ETFA_PARDE
3 PsiBlast_PDB 86.9556% -31 - C3 -2A1U 12.1 ETFA_HUMAN
4 PsiBlast_PDB 86.8456% -33 - C3 -1EFV 12.8 ETFA_HUMAN
32 HHSearch 86.4457% -32 * C3 *1EFV 12.8 ETFA_HUMAN
2 PsiBlast_PDB 81.9156% -38 - C3 -2A1T - ETFA_HUMAN -
22 Fugue 79.7258% -13 - C3 -1EFP 12.4 ETFA_PARDE
33 HHSearch 77.8958% -7 - C3 -1EFP 12.4 ETFA_PARDE
1 PsiBlast_PDB 65.6656% -88 - C3 -1T9G - ETFA_HUMAN -
35 HHSearch 64.5729% -3 - C3 -4L2I - ? -
19 PsiBlast_CBE 62.4531% -0 - C3 -1O96 - ETFA_METME -
11 PsiBlast_PDB 62.1931% -1 - C3 -1O97 - ETFA_METME -
34 HHSearch 61.9831% -7 - C3 -1O97 - ETFA_METME -
13 PsiBlast_PDB 61.9831% -6 - C3 -3CLT - ETFA_METME -
15 PsiBlast_PDB 61.8131% -6 - C3 -3CLS - ETFA_METME -
14 PsiBlast_PDB 61.0131% -6 - C3 -3CLR - ETFA_METME -
12 PsiBlast_PDB 60.9931% -4 - C3 -3CLU - ETFA_METME -
21 PsiBlast_CBE 60.2731% -0 - C3 -1O96 - ETFA_METME -
20 PsiBlast_CBE 59.6731% 2 - C3 -1O96 - ETFA_METME -
10 PsiBlast_PDB 59.5631% -1 - C3 -1O96 - ETFA_METME -
7 PsiBlast_PDB 55.3634% 4 - C3 -4L2I 12.1 ?
6 PsiBlast_PDB 55.0534% 4 - C3 -4KPU 12.2 ?