@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VTF1: (2017-12-13 )
MTIIGVDSVAKIVVVTSGKGGVGKTTTSASFATGLALRGHKTVVIDFDVGLRNLDLIMGCERRVVYDFVNVINNEARLQQALIRDKDIENLYILPASQTRDKDALSDEGVARVIDELSQEFDYIICDSPAGIERGAILAMYHADEAIIVTNPEISSVRDSDRIIGMLDSKTKKVEQNEGRIRKHLCITRFNPERADRQEMLTIDDISKDILRVPTLGVIPECPSVLQASNEGKPVILYSETKAGQAYDDLVARFLGEDRPYRHITAQPKGWLARLFGA

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_A_4(3Q9L)
MIND_ECOLI
[Raw transfer]



ATP_B_6(3Q9L)
MIND_ECOLI
[Raw transfer]



ATP_B_6(3Q9L)
MIND_ECOLI
[Raw transfer]



ATP_B_6(3Q9L)
MIND_ECOLI
[Raw transfer]



ADP_B_6(3R9J)
MIND_ECOLI
[Raw transfer]



ANP_A_3(5J1J)
?
[Raw transfer]



ADP_B_10(3R9I)
MIND_ECOLI
[Raw transfer]



ANP_B_8(5J1J)
?
[Raw transfer]



ADP_A_9(3R9I)
MIND_ECOLI
[Raw transfer]



ADP_B_6(3R9J)
MIND_ECOLI
[Raw transfer]



ADP_A_3(4V03)
?
[Raw transfer]



ATP_A_6(4V02)
?
[Raw transfer]



ATP_B_8(4V02)
?
[Raw transfer]



ADP_B_5(4V03)
?
[Raw transfer]



ADP_A_3(4V03)
?
[Raw transfer]



ACP_A_3(1G3R)
?
[Raw transfer]



ATP_B_6(3Q9L)
MIND_ECOLI
[Raw transfer]



ATP_A_6(4V02)
?
[Raw transfer]



ADP_D_12(3R9I)
MIND_ECOLI
[Raw transfer]



ADP_D_12(3R9I)
MIND_ECOLI
[Raw transfer]



ADP_B_10(3R9I)
MIND_ECOLI
[Raw transfer]



ADP_D_12(3R9I)
MIND_ECOLI
[Raw transfer]
127 Fugue 83.7566% -56 - C1 -3Q9L 2.2 MIND_ECOLI
1 PsiBlast_PDB 82.8165% -62 - C1 -3Q9L 2.2 MIND_ECOLI
2 PsiBlast_PDB 82.7565% -67 - C1 -3R9I 2.8 MIND_ECOLI
24 PsiBlast_CBE 82.3665% -72 - C1 -3R9I 7.4 MIND_ECOLI
23 PsiBlast_CBE 82.2765% -72 - C1 -3R9I 2.8 MIND_ECOLI
25 PsiBlast_CBE 82.1865% -60 - C1 -3Q9L 8.0 MIND_ECOLI
22 PsiBlast_CBE 82.1665% -68 - C1 -3R9I 7.5 MIND_ECOLI
3 PsiBlast_PDB 81.9165% -77 - C1 -3R9J 2.9 MIND_ECOLI
137 HHSearch 81.7767% -52 - C1 -3Q9L 2.2 MIND_ECOLI
21 PsiBlast_CBE 81.7365% -75 - C1 -3R9J 7.3 MIND_ECOLI
138 HHSearch 81.2667% -56 - C1 -3R9I 7.4 MIND_ECOLI
139 HHSearch 63.2944% -30 - C1 -4V02 7.9 ?
5 PsiBlast_PDB 63.1541% -32 - C1 -4V02 7.9 ?
142 HHSearch 62.3145% -27 - C1 -4V03 9.4 ?
4 PsiBlast_PDB 61.9342% -29 - C1 -4V03 9.4 ?
26 PsiBlast_CBE 61.7342% -29 - C1 -4V03 8.8 ?
27 PsiBlast_CBE 61.4141% -31 - C1 -4V02 7.9 ?
148 HHSearch 54.8830% -42 - C1 -1G3R - ? -
147 HHSearch 54.2730% -45 * C1 *1G3Q - ? -
8 PsiBlast_PDB 53.3533% -37 - C1 -1ION - ? -