@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VTF7: (2017-12-13 )
MKTLPLSQYIFPDPEESDPDGHGLICIGADLSPSTLYEAYTHGLFPWFNEDEPICWWNPEPRCIIYPQNYKPSKSLIRNMKKYDYTITVNRAFEQVIRSCSLPRSYANETWISEDIIEGYCGMFDAGYGYSVEVWQEEQLVGGLYGVTIGKGCFGESMFSTQTDVSKMAFYTLMLIGQENQLPWVDCQLVNSHLISLGACTLSRQEYLKSLQDVIIHPSINWKKYQERVFSSKTIALNAKLME

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

PHE_A_3(2Z3O)
LFTR_ECOLI
[Raw transfer]



LEU_A_3(2Z3P)
LFTR_ECOLI
[Raw transfer]



PUY_F_6(2DPT)
LFTR_ECOLI
[Raw transfer]



XYA_A_3(2Z3K)
LFTR_ECOLI
[Raw transfer]



LEU_B_4(2Z3P)
LFTR_ECOLI
[Raw transfer]



XYA_B_5(2Z3K)
LFTR_ECOLI
[Raw transfer]



PHE_A_4(2Z3K)
LFTR_ECOLI
[Raw transfer]



3D1_B_5(2Z3M)
LFTR_ECOLI
[Raw transfer]



PUY_E_5(2DPT)
LFTR_ECOLI
[Raw transfer]



3D1_A_3(2Z3M)
LFTR_ECOLI
[Raw transfer]
28 HHSearch 91.4236%-118 * C8 *2Z3O - LFTR_ECOLI -
22 PsiBlast_CBE 88.9041%-105 - C8 -2Z3P 3.6 LFTR_ECOLI
5 PsiBlast_PDB 88.3241%-105 - C8 -2Z3K 3.4 LFTR_ECOLI
8 PsiBlast_PDB 87.9441%-102 - C8 -2Z3P 3.2 LFTR_ECOLI
7 PsiBlast_PDB 87.9141%-103 - C8 -2Z3O 3.8 LFTR_ECOLI
23 PsiBlast_CBE 87.8041%-103 - C8 -2Z3O - LFTR_ECOLI -
25 PsiBlast_CBE 87.7141%-108 - C8 -2Z3M 4.1 LFTR_ECOLI
4 PsiBlast_PDB 87.6441%-107 - C8 -2Z3N - LFTR_ECOLI -
6 PsiBlast_PDB 87.3741%-106 - C8 -2Z3M 3.6 LFTR_ECOLI
24 PsiBlast_CBE 87.0941% -99 - C8 -2Z3N - LFTR_ECOLI -
26 PsiBlast_CBE 87.0441%-109 - C8 -2Z3L - LFTR_ECOLI -
27 PsiBlast_CBE 86.6741%-104 - C8 -2Z3K 5.2 LFTR_ECOLI
3 PsiBlast_PDB 85.0741%-106 - C8 -2Z3L - LFTR_ECOLI -
1 PsiBlast_PDB 79.9340% -8 - C8 -2DPS - LFTR_ECOLI -
21 PsiBlast_CBE 79.8140% -8 - C8 -2DPT 8.1 LFTR_ECOLI
2 PsiBlast_PDB 79.6640% -7 - C8 -2DPT 6.4 LFTR_ECOLI
9 PsiBlast_PDB 53.5041% -15 - C- -2CXA - LFTR_ECOLI -
30 HHSearch 40.447% -47 - C8 -1P4N - FEMX_WEIVI -
47 HHSearch 37.5510%-166 - C8 -3CXP - GNA1_HUMAN -
55 Fugue 36.2620% 0 - C5 -5T9Y - ? -