@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VTK9: (2017-12-14 )
MSIQVKNIEKHFGAFHALKNISLDFPEGELVALLGPSGCGKTTLLRIIAGLESAEGGQVLLEGEYATNVHVRERQVGFVFQHYALFRHMTVFDNIAFGLRVRPRATRPSEAEIKKRVTRLLDLVQLGFLADRYPAQLSGGQRQRIALARALAVEPRVLLLDEPFGALDAKVRKELRRWLRNLHDELHITSIFVTHDQEEALEVADQIIVMNKGNVEQIGSLREVYEKPATPFVFDFLGQANRFEGEHASGIIRIGNDRIELPTTVQAPQGKVIAFARPDELHIHAQPQANTIEATFVREVWIAGKVVAELQDRNGRLIEIALSSEAAKQHAFKPNQTVWVSASQLHLFADQVA

Atome Classification :

(43 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ATP_A_6(4YMV)
?
[Raw transfer]




ATP_A_7(4YMU)
?
[Raw transfer]




ATP_J_5(4YMU)
?
[Raw transfer]




ATP_A_3(3FVQ)
FBPC_NEIG1
[Raw transfer]




ATP_B_6(3FVQ)
FBPC_NEIG1
[Raw transfer]




ANP_J_5(3C41)
?
[Raw transfer]




ATP_B_6(3FVQ)
FBPC_NEIG1
[Raw transfer]




AGS_B_6(3C4J)
?
[Raw transfer]




ATP_A_5(1B0U)
HISP_SALTY
[Raw transfer]




ATP_J_5(4YMV)
?
[Raw transfer]




ANP_K_6(3C41)
?
[Raw transfer]




ACP_A_4(5X40)
CBIO_RHOCB
[Raw transfer]




AGS_A_4(3C4J)
?
[Raw transfer]




ADP_A_5(2Q0H)
?
[Raw transfer]




ADP_A_2(4U00)
?
[Raw transfer]




ADP_B_6(2OLJ)
?
[Raw transfer]




POP_A_9(2D62)
?
[Raw transfer]




ADP_B_6(2Q0H)
?
[Raw transfer]




POP_A_9(2D62)
?
[Raw transfer]




ACP_B_6(5X40)
CBIO_RHOCB
[Raw transfer]




ADP_A_5(2OLJ)
?
[Raw transfer]




128_A_2(2PMK)

[Raw transfer]




AT4_B_6(2OLK)
?
[Raw transfer]




AT4_D_8(2OLK)
?
[Raw transfer]




AT4_C_7(2OLK)
?
[Raw transfer]




AT4_A_5(2OLK)
?
[Raw transfer]




LMT_B_4(4MKI)
ECFA2_CALS4
[Raw transfer]




LMT_A_7(4MKI)
ECFA2_CALS4
[Raw transfer]




IPA_A_6(3TIF)
Y796_METJA
[Raw transfer]




2 PsiBlast_PDB 81.4837% -87 - C2 -2YYZ - ? -
153 HHSearch 79.3938% -85 - C2 -2YYZ - ? -
162 HHSearch 75.4938% -90 - C2 -2IT1 - ? -
1 PsiBlast_PDB 74.5942% -1 - C2 -1Z47 - ? -
30 PsiBlast_CBE 74.4245%-148 - C2 -3PUX - MALK_ECOLI -
19 PsiBlast_PDB 74.4245%-150 - C2 -3PUV - MALK_ECOLI -
155 HHSearch 73.6934%-104 - C2 -4TQU - ? -
5 PsiBlast_PDB 73.2746%-128 - C2 -2IT1 - ? -
27 PsiBlast_CBE 72.7945%-152 - C2 -3PUZ - MALK_ECOLI -
171 Fugue 72.7141% 14 - C2 -1Z47 - ? -
166 HHSearch 72.6537% -94 - C2 -1V43 - ? -
26 PsiBlast_CBE 72.0545%-149 - C2 -3RLF - MALK_ECOLI -
18 PsiBlast_PDB 71.5545%-145 - C2 -3PV0 - MALK_ECOLI -
23 PsiBlast_CBE 71.4945%-143 - C2 -4KI0 - MALK_ECOLI -
160 HHSearch 71.2141% -13 - C2 -1Z47 - ? -
157 HHSearch 71.2041% -12 - C2 -1Z47 - ? -
28 PsiBlast_CBE 71.1745%-144 - C2 -3PUY - MALK_ECOLI -
16 PsiBlast_PDB 71.1545%-145 - C2 -3PUY - MALK_ECOLI -
150 HHSearch 70.8134%-101 - C2 -3RLF - MALK_ECOLI -
20 PsiBlast_PDB 70.7445%-146 - C2 -3PUW - MALK_ECOLI -
161 HHSearch 67.8639% 14 - C2 -2D62 3.1 ?
6 PsiBlast_PDB 67.7237% 9 - C2 -2D62 3.1 ?
52 PsiBlast_CBE 61.3439% -23 - C2 -3FVQ 7.5 FBPC_NEIG1
53 PsiBlast_CBE 60.8439% -22 - C2 -3FVQ 6.8 FBPC_NEIG1
152 HHSearch 58.0433% -21 - C2 -3FVQ 7.5 FBPC_NEIG1
67 PsiBlast_CBE 54.0938% -39 - C2 -4YMV 5.2 ?
70 PsiBlast_CBE 52.8138% -40 - C2 -4YMU 6.0 ?
69 PsiBlast_CBE 52.5638% -37 - C2 -4YMU 6.0 ?
68 PsiBlast_CBE 52.4638% -40 - C2 -4YMV 5.8 ?
66 PsiBlast_CBE 52.0440% -41 - C2 -4U00 6.2 ?
104 PsiBlast_CBE 50.4632% -37 - C2 -1B0U 6.0 HISP_SALTY
82 PsiBlast_CBE 48.0238% -24 - C2 -2OLK 6.0 ?
81 PsiBlast_CBE 47.9738% -19 - C2 -2OLK 5.8 ?
83 PsiBlast_CBE 47.8938% -18 - C2 -2OLK 5.9 ?
74 PsiBlast_CBE 46.9638% -22 - C2 -3C4J 6.6 ?
73 PsiBlast_CBE 46.7138% -20 - C2 -3C4J 4.9 ?
84 PsiBlast_CBE 46.0138% -21 - C2 -2OLK 5.9 ?
86 PsiBlast_CBE 45.9238% -18 - C2 -2OLJ 5.9 ?
76 PsiBlast_CBE 45.9238% -20 - C2 -2Q0H 5.5 ?
85 PsiBlast_CBE 45.8038% -19 - C2 -2OLJ 5.7 ?
72 PsiBlast_CBE 45.3138% -18 - C2 -3C41 6.6 ?
75 PsiBlast_CBE 45.1038% -23 - C2 -2Q0H 5.5 ?
71 PsiBlast_CBE 44.4738% -23 - C2 -3C41 5.8 ?