@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VTN8: (2017-12-14 )
MDVRLSDRVNAIKPSPTLAVTNKAAELKAAGKNVIGLGAGEPDFDTPQHIKDAAIEAINNGFTKYTAVDGTPGLKKAIIAKLKRDNNLDYQPNQILVSCGGKQSFFNLALALLNKGDEVIIPAPFWVSYPDMVIIAEGTPVIVKCGEEQRFKITPEQLEAAITPNTRLVVLNSPSNPTGMIYSKAELEALAEVLRRHPQVFVASDDMYEPIRWEDEFYNIATVAPDLYDRTIVLNGVSKAYAMTGWRIGYAAGPAKIIGAMKKIQSQSTSNPTSISQVAAEAALNGPQDVLKPMIEAFKRRHDLVVNGLNDIKGISCLPADGAFYAYANIRPLIRAKGLKSCTEFSEWLLEETGVAVVPGDAFGLGGFMRISYATADEVLVDALARIKKAAESIEGVDAAIASIEAEKAAK

Atome Classification :

(28 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ASP_D_4(1GCK)
AAT_THET8
[Raw transfer]



GLU_D_4(1GDE)
?
[Raw transfer]



PLP_E_5(1GDE)
?
[Raw transfer]



PLP_E_5(1GDE)
?
[Raw transfer]



PLP_F_6(1GDE)
?
[Raw transfer]



GOL_A_8(3E2Y)
KAT3_MOUSE
[Raw transfer]



PLP_B_4(1GD9)
?
[Raw transfer]



GLU_C_3(1GDE)
?
[Raw transfer]



PLP_F_6(1GCK)
AAT_THET8
[Raw transfer]



PLP_B_13(1O4S)
AAT_THEMA
[Raw transfer]



PLP_A_3(1GD9)
?
[Raw transfer]



PLP_A_12(1O4S)
AAT_THEMA
[Raw transfer]



PLP_B_13(1O4S)
AAT_THEMA
[Raw transfer]



PLP_B_4(1DJU)
?
[Raw transfer]



ASP_C_3(1GCK)
AAT_THET8
[Raw transfer]



PLP_E_5(1GCK)
AAT_THET8
[Raw transfer]



PLP_B_6(1B5P)
AAT_THET8
[Raw transfer]



PLP_A_5(1B5O)
AAT_THET8
[Raw transfer]



PLP_B_4(1J32)
?
[Raw transfer]



PLP_B_4(1J32)
?
[Raw transfer]



PLP_B_6(1B5P)
AAT_THET8
[Raw transfer]



PLP_A_3(1DJU)
?
[Raw transfer]



PLP_B_6(5BJ4)
AAT_THET8
[Raw transfer]



PLP_B_6(1B5O)
AAT_THET8
[Raw transfer]
74 HHSearch 89.4039%-111 - C1 -1O4S 4.2 AAT_THEMA
21 PsiBlast_CBE 89.1545% -51 - C1 -1J32 4.9 ?
1 PsiBlast_PDB 89.1345% -54 - C1 -1J32 - ? -
14 PsiBlast_PDB 88.2637%-108 - C1 -1O4S 4.5 AAT_THEMA
46 PsiBlast_CBE 87.7737%-110 - C1 -1O4S 4.2 AAT_THEMA
63 HHSearch 87.4345% -39 * C1 *1J32 4.9 ?
64 HHSearch 86.8345% -69 - C1 -1BJW - AAT_THET8 -
66 HHSearch 84.6944% -68 - C1 -1B5P 4.6 AAT_THET8
23 PsiBlast_CBE 84.5644% -73 - C1 -1BKG - AAT_THET8 -
2 PsiBlast_PDB 84.4644% -73 - C1 -1BKG - AAT_THET8 -
4 PsiBlast_PDB 84.1644% -72 - C1 -1BJW - AAT_THET8 -
24 PsiBlast_CBE 84.1444% -72 - C1 -1BKG - AAT_THET8 -
22 PsiBlast_CBE 83.8244% -71 - C1 -1BKG - AAT_THET8 -
3 PsiBlast_PDB 83.5544% -72 - C1 -1B5O 4.8 AAT_THET8
8 PsiBlast_PDB 82.7643% -77 - C1 -1GC4 - AAT_THET8 -
5 PsiBlast_PDB 82.7144% -71 - C1 -1GCK 6.0 AAT_THET8
13 PsiBlast_PDB 82.6541% -29 - C1 -1GD9 3.6 ?
45 PsiBlast_CBE 82.5641% -30 - C1 -1GD9 3.4 ?
6 PsiBlast_PDB 82.5544% -71 - C1 -1B5P - AAT_THET8 -
44 PsiBlast_CBE 82.5241% -28 - C1 -1GDE 4.2 ?
12 PsiBlast_PDB 82.3841% -26 - C1 -1GDE 3.7 ?
69 HHSearch 82.2741% -24 - C1 -1GDE 3.5 ?
27 PsiBlast_CBE 81.9444% -71 - C1 -1B5P 4.6 AAT_THET8
25 PsiBlast_CBE 81.8544% -73 - C1 -1B5O 5.6 AAT_THET8
29 PsiBlast_CBE 80.6143% -76 - C1 -5BJ4 5.1 AAT_THET8
26 PsiBlast_CBE 80.2444% -71 - C1 -1GCK 5.9 AAT_THET8
43 PsiBlast_CBE 79.9741% -34 - C1 -1DJU 3.6 ?
11 PsiBlast_PDB 79.0341% -27 - C1 -1DJU 3.2 ?