@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VTP6: (2017-12-14 )
MSKDTIIALHAEHQGRWKNREEIAERMIALIGQLYREKNIVVSVYGRSLINRSVIQILKTHRRTRVVDVELSVVNTFPILEALAKVENIGSAEVDIGKLAVEYKEKGGDVDAFVAQAVESIKGSATSEQPKDVVLYGFGRIGRILARLIISQSGLGRGLSLKAIVVRKSSDGDLAKRASLLRRDSIHGTFAGTISVDEENEAIIANGNFIKVIYASSPSEVDYTQYGIENALLIDNTGKWRDAEGLSQHLKCPGVARVVLTAPSKGEMKNVVFGVNNSDILDEDKIISAASCTTNAITPILKVLDDKYKVLNGHVETVHSFTNDQNLIDNYHKADRRGRAATLNMVITETGAAKAVAKALPALKGKLTGNSVRVPTPNVSLAILNLTLDKEVDREEVNEYIRQISINSNLQGQIGYTNSTEVVSSDFIGSRTAGVYDAQATITSGNRLTAYVWYDNEVGYSCQVLRIAEQMCGVSYKKIPAETNA

Atome Classification :

(35 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

NDP_B_14(1RM4)
G3PA_SPIOL
[Raw transfer]



NAD_O_12(1NBO)
G3PA_SPIOL
[Raw transfer]



NAD_A_13(1NBO)
G3PA_SPIOL
[Raw transfer]



NAD_A_5(3B1J)
?
[Raw transfer]



NAD_B_7(3B1J)
?
[Raw transfer]



NDP_A_16(1RM3)
G3PA_SPIOL
[Raw transfer]



NDP_A_13(1RM4)
G3PA_SPIOL
[Raw transfer]



NDP_B_16(1RM5)
G3PA_SPIOL
[Raw transfer]



NDP_B_17(1RM3)
G3PA_SPIOL
[Raw transfer]



NDP_O_15(1RM3)
G3PA_SPIOL
[Raw transfer]



NAD_Q_15(1HDG)
G3P_THEMA
[Raw transfer]



NAD_A_3(4BOY)
?
[Raw transfer]



NAD_A_3(3ZCX)
?
[Raw transfer]



NAD_O_13(1HDG)
G3P_THEMA
[Raw transfer]



NDP_A_15(1RM5)
G3PA_SPIOL
[Raw transfer]



NAD_B_4(3L0D)
?
[Raw transfer]



NDP_O_12(1RM4)
G3PA_SPIOL
[Raw transfer]



NAD_A_5(3ZDF)
?
[Raw transfer]



NAD_B_4(4BOY)
?
[Raw transfer]



NAD_O_13(1HDG)
G3P_THEMA
[Raw transfer]



NAD_B_6(3ZDF)
?
[Raw transfer]



NAD_B_4(4BOY)
?
[Raw transfer]



NDP_O_14(1RM5)
G3PA_SPIOL
[Raw transfer]
115 PsiBlast_CBE 94.4240% 0 - C- -2D2I - ? -
113 PsiBlast_CBE 94.4240% 0 - C- -2D2I - ? -
110 PsiBlast_CBE 94.4240% 0 - C- -2D2I - ? -
21 PsiBlast_CBE 91.3840% -90 - C7 -1HDG 7.8 G3P_THEMA
1 PsiBlast_PDB 90.6940% -89 - C7 -1HDG 8.2 G3P_THEMA
31 PsiBlast_CBE 90.5739% 0 - C- -1JN0 - G3PA_SPIOL -
30 PsiBlast_CBE 90.5739% 0 - C- -1JN0 - G3PA_SPIOL -
7 PsiBlast_PDB 90.5739% 0 - C- -1JN0 - G3PA_SPIOL -
55 PsiBlast_CBE 89.6339% -87 - C7 -3ZCX - ? -
53 PsiBlast_CBE 89.5039% -85 - C7 -4BOY 9.0 ?
15 PsiBlast_PDB 89.4439% -86 - C7 -3ZCX 8.8 ?
16 PsiBlast_PDB 89.3339% -89 - C7 -3ZDF 9.1 ?
17 PsiBlast_PDB 89.0739% -88 - C7 -4BOY 9.2 ?
153 HHSearch 88.7635% -65 - C7 -1YWG - ? -
54 PsiBlast_CBE 88.7539% -87 - C7 -3ZDF 9.1 ?
73 PsiBlast_CBE 86.7840% -41 - C7 -3B20 - ? -
70 PsiBlast_CBE 86.0640% -44 - C7 -3B20 - ? -
80 PsiBlast_CBE 86.0140% -47 - C7 -3B1J 9.0 ?
74 PsiBlast_CBE 85.9940% -44 - C7 -3B20 - ? -
151 HHSearch 85.7838% -50 - C7 -5O0V - ? -
81 PsiBlast_CBE 85.5440% -45 - C7 -3B1J 9.2 ?
159 HHSearch 84.2339% -20 - C7 -4BOY 8.8 ?
129 Fugue 83.1840% -42 - C7 -1HDG 9.1 G3P_THEMA
9 PsiBlast_PDB 77.6541% -5 - C7 -1RM4 6.8 G3PA_SPIOL
40 PsiBlast_CBE 77.6041% -10 - C7 -1RM5 8.7 G3PA_SPIOL
38 PsiBlast_CBE 77.5841% -8 - C7 -1RM3 7.9 G3PA_SPIOL
41 PsiBlast_CBE 77.2641% -11 - C7 -1RM5 8.2 G3PA_SPIOL
12 PsiBlast_PDB 77.1641% -6 - C7 -1RM3 8.2 G3PA_SPIOL
13 PsiBlast_PDB 77.0741% -8 - C7 -1RM5 8.4 G3PA_SPIOL
8 PsiBlast_PDB 76.9841% -4 - C7 -1NBO 9.9 G3PA_SPIOL
34 PsiBlast_CBE 76.9141% -9 - C7 -1RM4 6.9 G3PA_SPIOL
37 PsiBlast_CBE 76.5941% -7 - C7 -1NBO 8.7 G3PA_SPIOL
35 PsiBlast_CBE 76.3841% -5 - C7 -1RM4 8.2 G3PA_SPIOL
39 PsiBlast_CBE 76.1541% -6 - C7 -1RM3 9.7 G3PA_SPIOL
102 PsiBlast_CBE 72.0540% -18 - C7 -3L0D 9.8 ?