@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
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Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VTR5: (2017-12-15 )
MKFFLSLFTLFSIFCTTLTNAALLNIAPESVEAAAWTIVDTQSGQIIAEHNSHVQRAPASLTKMMVAYIALKEIKAGKLKLNEVITATPVVSVVQWDESQMYLKAGEQISVDQLLAGLIVMSANDAAVTLAEKISGDVPHFVQRMNQEAQALGMKDTHFSNPAGITMPDHYTTAHDLSLLSQAVIHQTPEYLHYSKMPSFSYNQRFHHATNLALKYDPSVDGLKTGYTQAAGYNLALTASRPSFSPNLPQRRLLVIVLGTPSAVKRAEIADKLMNLAYAYTRDEVVIPEQKLIAELPVIKSTLKMFKVETKQPTIVTTSLYAEPTPIDLNTFDYATQRIQVLDSNQQPKVIAPLETTQTRVNIQLNEQKLTAPLMKAMNLATVSIYQNNQLIRSLQIENDVHIEEANIFQRIMMWFSNLFSIFSSSEHSAAKLYPIDSH

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

UNL_H_8(1TVF)
?
[Raw transfer]



UNL_I_9(1TVF)
?
[Raw transfer]



SIN_B_5(4K91)
?
[Raw transfer]



IM2_A_2(3MZF)
DACA_ECOLI
[Raw transfer]



SIN_B_5(4K91)
?
[Raw transfer]



CXV_A_2(3MZD)
DACA_ECOLI
[Raw transfer]



HJ3_A_2(3BEB)
DACA_ECOLI
[Raw transfer]



OK3_A_2(5J8X)
DACA_ECOLI
[Raw transfer]



BO9_A_2(1Z6F)
DACA_ECOLI
[Raw transfer]



HJ2_A_3(3BEC)
DACA_ECOLI
[Raw transfer]



EDO_B_11(3MFD)
DACB_BACSU
[Raw transfer]
55 HHSearch 84.0434% -81 - C4 -4K91 1.7 ?
38 Fugue 75.9830% -38 - C4 -1HD8 - DACA_ECOLI -
48 HHSearch 72.7430% 20 - C4 -3MZF - DACA_ECOLI -
2 PsiBlast_PDB 72.6538% 0 - C- -5FSR - DACD_ECOLI -
49 HHSearch 72.3331% 23 - C4 -3ITB - DACC_ECOLI -
53 HHSearch 72.2731% 13 - C4 -3A3J - DACA_HAEIN -
50 HHSearch 72.0631% 21 - C4 -3ITB - DACC_ECOLI -
39 Fugue 70.3834% -66 - C4 -1HD8 - DACA_ECOLI -
8 PsiBlast_PDB 69.6428% 20 - C4 -5J8X 4.1 DACA_ECOLI
7 PsiBlast_PDB 69.4930% 17 - C4 -3A3J - DACA_HAEIN -
1 PsiBlast_PDB 69.3739% -18 - C4 -4K91 - ? -
13 PsiBlast_PDB 69.1334% -20 - C4 -3BEC 3.7 DACA_ECOLI
12 PsiBlast_PDB 68.6434% -17 - C4 -3BEB 3.7 DACA_ECOLI
21 PsiBlast_CBE 68.5139% -22 - C4 -4K91 1.7 ?
9 PsiBlast_PDB 68.1834% -14 - C4 -1NZO - DACA_ECOLI -
16 PsiBlast_PDB 67.9134% -17 - C4 -3MZF 4.2 DACA_ECOLI
27 PsiBlast_CBE 67.7335% -72 - C4 -3ITA - DACC_ECOLI -
11 PsiBlast_PDB 67.5334% -19 - C4 -1Z6F 3.3 DACA_ECOLI
14 PsiBlast_PDB 67.4434% -14 - C4 -3MZD 3.5 DACA_ECOLI
15 PsiBlast_PDB 67.3634% -16 - C4 -3MZE - DACA_ECOLI -