@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VTX0: (2017-12-15 )
MPNLVVFSGNAHPQFAQKVVSHLHIPLGAASVGQFSDGEISVEITENVRGKDVFIVQPTCAPTNDNLMEILVMADALRRASAGRITAVIPYFGYARQDRRPRSARVPITAKVVADMLTTVGIDRVVMIDLHADQIQGFFDIPVDNIYGTPALLADLRQQQHDNLMVVSPDVGGVVRARAVAKQMGDIDLAIIDKRRQKANESQVMHLIGDVKDRDCVIVDDMVDTAGTLCKAADALKQFGARRVVAYATHPVLSGKAIENLRNSVIDELVVTDTIPLSEEALNLGKIRQVSVASMVAETIRRINNEESISAMFDSL

Atome Classification :

(21 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

AMP_B_13(3DAH)
?
[Raw transfer]




AMP_B_13(3DAH)
?
[Raw transfer]




ABM_F_6(1DKU)
KPRS_BACSU
[Raw transfer]




AMP_A_11(2HCR)
PRPS1_HUMAN
[Raw transfer]




AMP_A_11(3DAH)
?
[Raw transfer]




AMP_B_12(3DAH)
?
[Raw transfer]




AMP_B_12(3DAH)
?
[Raw transfer]




R5P_H_8(1U9Z)
KPRS_METJA
[Raw transfer]




AMP_B_12(2HCR)
PRPS1_HUMAN
[Raw transfer]




ADP_B_6(3NAG)
KPRS_THEVO
[Raw transfer]




ADP_C_10(5T3O)
?
[Raw transfer]




ABM_E_5(1DKU)
KPRS_BACSU
[Raw transfer]




ABM_E_5(1DKU)
KPRS_BACSU
[Raw transfer]




ABM_E_5(1DKU)
KPRS_BACSU
[Raw transfer]




R5P_F_6(1U9Z)
KPRS_METJA
[Raw transfer]




21 PsiBlast_PDB 92.4769%-157 - C9 -4S2U - KPRS_ECOLI -
41 PsiBlast_CBE 91.8968%-170 - C9 -3DAH 4.2 ?
42 PsiBlast_CBE 90.7868%-171 - C9 -3DAH 3.7 ?
22 PsiBlast_PDB 89.7368%-170 - C9 -3DAH 3.0 ?
9 HHSearch 84.8469% -67 - C9 -4S2U - KPRS_ECOLI -
55 PsiBlast_CBE 83.8147%-179 - C9 -1DKU 3.1 KPRS_BACSU
5 HHSearch 83.7447%-177 - C9 -1DKU 3.6 KPRS_BACSU
35 PsiBlast_PDB 83.6847%-177 - C9 -1DKU 3.6 KPRS_BACSU
72 Fugue 83.3548%-174 - C9 -1DKU 3.6 KPRS_BACSU
8 HHSearch 82.3167% -65 - C9 -3DAH 4.2 ?
7 HHSearch 82.2467% -73 - C9 -3DAH 3.7 ?
4 HHSearch 82.0447%-176 - C9 -1DKR - KPRS_BACSU -
25 PsiBlast_PDB 76.6948% -72 - C9 -3EFH - PRPS1_HUMAN -
2 HHSearch 76.1049% -68 - C9 -3S5J - PRPS1_HUMAN -
1 HHSearch 76.0749% -63 - C9 -4LYG - PRPS1_HUMAN -
31 PsiBlast_PDB 75.9048% -74 - C9 -4F8E - PRPS1_HUMAN -
24 PsiBlast_PDB 75.8548% -71 - C9 -2HCR 4.3 PRPS1_HUMAN
26 PsiBlast_PDB 75.1948% -69 - C9 -3S5J - PRPS1_HUMAN -
28 PsiBlast_PDB 75.1548% -67 - C9 -4LZN - PRPS1_HUMAN -
30 PsiBlast_PDB 74.9748% -69 - C9 -4M0P - PRPS1_HUMAN -
45 PsiBlast_CBE 74.3948% -68 - C9 -2HCR 3.0 PRPS1_HUMAN