@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VTZ9: (2017-12-16 )
MSKLIVLSNRISMPSGKASAGGLAVAVQDALNDSNGIWLGWNGQQITDTEAPEFDQAYSHGIDYITCPLTHQQYAQYYCGFANKVLWPAMHDRDDLIEYNAEEYNTYQKVNRLFAEKLQQIAQPDDLIWVHDYHFFSVARHCRELGMQNKIGFFLHIPFASLNIWRKIPVALQLVQDLCQYDVIGLQTQTDQNTCMQTCMGLLEAQKILSDRISYKKRQILIKSYPIGVQPELIQRQAQQAFHTPYVFNFEDIPRQKTIIGVDRIDYSKGLLERFNAFATFLETNPEYHGLVRHLQVATPSRTDIPAYQRLYQRFKAKLELINEEFAHEDWRPIDCCFDTVQHDSLMHIYRRSDICWISSLRDGMNLVAKEYIAAQDPENPGVLILSKYAGAAEQMTQALIVDPLDRAAMMDSLKTALEMSKAERINRYEQLIEGLAATDLSDWRNNFLKDLENSPTFTKSKLSLQEKYQPTYHAL

Atome Classification :

(31 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

UPG_A_3(1UQU)
OTSA_ECOLI
[Raw transfer]



UPG_B_5(5HUT)
TPS1_CANAL
[Raw transfer]



UPG_A_3(5HUT)
TPS1_CANAL
[Raw transfer]



U2F_B_4(1UQT)
OTSA_ECOLI
[Raw transfer]



U2F_A_3(1UQT)
OTSA_ECOLI
[Raw transfer]



GDG_A_2(5K42)
?
[Raw transfer]



UPG_A_3(5HUV)
TPS1_CANAL
[Raw transfer]



ADP_A_2(5JIO)
?
[Raw transfer]



UDP_A_3(5HVM)
?
[Raw transfer]



ADP_A_2(5JIO)
?
[Raw transfer]



UDP_B_6(5HVL)
TPS1_CANAL
[Raw transfer]



UDP_B_6(5HVL)
TPS1_CANAL
[Raw transfer]



T6P_A_2(5K44)
?
[Raw transfer]



UDP_A_3(5HUU)
TPS1_CANAL
[Raw transfer]



UDP_A_3(5HUU)
TPS1_CANAL
[Raw transfer]



UDP_B_5(5HUU)
TPS1_CANAL
[Raw transfer]



UDP_A_3(5HVL)
TPS1_CANAL
[Raw transfer]



TRE_A_2(5K5C)
?
[Raw transfer]



TRE_B_14(3T7D)
?
[Raw transfer]



G6P_A_4(5HUU)
TPS1_CANAL
[Raw transfer]



NHE_A_4(5K5C)
?
[Raw transfer]



G6P_B_6(5HUU)
TPS1_CANAL
[Raw transfer]



NHE_A_3(5K44)
?
[Raw transfer]



EDO_B_25(5UOF)
?
[Raw transfer]



EDO_B_25(5UOF)
?
[Raw transfer]



EDO_A_8(5K5C)
?
[Raw transfer]



EDO_A_16(5UOF)
?
[Raw transfer]



EDO_A_12(5UOF)
?
[Raw transfer]
34 PsiBlast_CBE 93.8539%-114 - C2 -1UQT 8.1 OTSA_ECOLI
32 PsiBlast_CBE 91.6139%-115 - C2 -2WTX - OTSA_ECOLI -
53 HHSearch 85.3137% -62 - C2 -1UQU - OTSA_ECOLI -
4 PsiBlast_PDB 82.9539% -34 - C2 -2WTX - OTSA_ECOLI -
5 PsiBlast_PDB 82.9339% -38 - C2 -1UQU 8.4 OTSA_ECOLI
7 PsiBlast_PDB 82.7138% -34 - C2 -1GZ5 - OTSA_ECOLI -
6 PsiBlast_PDB 82.4439% -39 - C2 -1UQT 9.1 OTSA_ECOLI
33 PsiBlast_CBE 82.2239% -36 - C2 -2WTX - OTSA_ECOLI -
31 PsiBlast_CBE 81.8739% -33 - C2 -2WTX - OTSA_ECOLI -
21 PsiBlast_CBE 81.7242% -9 - C2 -5UOF 3.1 ?
1 PsiBlast_PDB 80.9042% -7 - C2 -5UOF 3.0 ?
45 HHSearch 80.2038% -38 * C2 *5V0T - ? -
52 HHSearch 80.0839% -19 - C2 -1GZ5 - OTSA_ECOLI -
48 HHSearch 80.0442% -19 - C2 -5UOF 3.1 ?
47 HHSearch 80.0042% -16 - C2 -5UOF 3.1 ?
26 PsiBlast_CBE 79.5838% 2 - C2 -5V0T - ? -
2 PsiBlast_PDB 79.4542% -9 - C2 -5TVG - ? -
28 PsiBlast_CBE 77.9438% 0 - C2 -5V0T - ? -
46 HHSearch 77.3838% -1 - C2 -5V0T - ? -
27 PsiBlast_CBE 77.0638% 2 - C2 -5V0T - ? -
9 PsiBlast_PDB 75.5932% -3 - C2 -5HUU 5.6 TPS1_CANAL
11 PsiBlast_PDB 75.5531% -2 - C2 -5HUV 7.2 TPS1_CANAL
10 PsiBlast_PDB 75.1732% -0 - C2 -5HVL 5.7 TPS1_CANAL
36 PsiBlast_CBE 75.0932% -17 - C2 -5HUU 4.6 TPS1_CANAL
35 PsiBlast_CBE 75.0232% -2 - C2 -5HVL 4.8 TPS1_CANAL
8 PsiBlast_PDB 74.3732% -3 - C2 -5HUT 7.2 TPS1_CANAL
37 PsiBlast_CBE 74.1932% -6 - C2 -5HUT 6.8 TPS1_CANAL
54 HHSearch 71.2632% 0 - C2 -5HUU 5.6 TPS1_CANAL
13 PsiBlast_PDB 70.3030% -2 - C2 -5HVM 5.3 ?
55 HHSearch 69.9032% 1 - C2 -5HVL 4.9 TPS1_CANAL
44 HHSearch 66.9430% -13 - C2 -5JIO 6.5 ?