@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VU26: (2017-12-16 )
MQFKYSLGVISLCSALFLVGCNDDNSSVSQTPTVQEQKQKLQPIIIQGALPVESERMASKLENKTVETIGGWTFWKGTYNGYPMIISKTRMGMSNSAAATALAIERYKPIAIINQGTAGGHDPDLHVYDIVLGKYATNIGAFRTPKQPLGGGSNSLTWVEAFDVLPTKESDPEPIAIRKFEGDQELLMAAHKVRYDKGEVVEGTIGSADVWNNELDRIQFFHERYGTSVEEMEAVSVAQIASQFNVPFLGIRILSNNITNNGAYDPGTGEACQDYVLNVAEE

Atome Classification :

(20 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

MTA_B_4(5B7P)
?
[Raw transfer]




5AD_A_3(5B7Q)
?
[Raw transfer]




5AD_B_4(5B7Q)
?
[Raw transfer]




MTA_A_3(5B7P)
?
[Raw transfer]




SAH_B_5(5B7N)
?
[Raw transfer]




ADE_A_3(5B7G)
?
[Raw transfer]




ADE_A_3(5B7G)
?
[Raw transfer]




ADE_B_5(5B7G)
?
[Raw transfer]




TRS_A_4(5UE1)
MTNN_VIBF1
[Raw transfer]




PG4_A_5(4F1W)
?
[Raw transfer]




23 PsiBlast_CBE 94.0343% -19 - C2 -5B7P 5.9 ?
21 PsiBlast_CBE 92.7743% -12 - C2 -5B7N 6.4 ?
2 PsiBlast_PDB 92.6743% -20 - C2 -5B7P 6.0 ?
24 PsiBlast_CBE 92.4543% -15 - C2 -5B7G 3.7 ?
22 PsiBlast_CBE 92.2743% -13 - C2 -5B7Q 6.8 ?
1 PsiBlast_PDB 91.6243% -14 - C2 -5B7N - ? -
25 HHSearch 91.3844% -7 - C2 -5B7G 3.9 ?
3 PsiBlast_PDB 90.6543% -13 - C2 -5B7Q 6.9 ?
4 PsiBlast_PDB 89.7143% -13 - C2 -5B7G 3.9 ?
43 HHSearch 82.9826% -44 - C2 -5DK6 - MTNN_COLP3 -
44 HHSearch 79.6327% -55 - C2 -5UE1 - MTNN_VIBF1 -
11 PsiBlast_PDB 77.6227% -65 - C2 -4F1W - ? -
39 HHSearch 77.6030% -40 - C2 -4QEZ - MTNN_BACAN -
13 PsiBlast_PDB 76.5127% -55 - C2 -4F2W - ? -
10 PsiBlast_PDB 75.5027% -60 - C2 -4G89 - MTNN_KLEP7 -
38 HHSearch 75.3030% -39 - C2 -4QEZ - MTNN_BACAN -
31 HHSearch 75.2328% -50 - C2 -4F1W 1.4 ?
15 PsiBlast_PDB 75.0627% -56 - C2 -4F3K - ? -
12 PsiBlast_PDB 74.9027% -57 - C2 -4F2P - ? -
14 PsiBlast_PDB 74.8527% -57 - C2 -4F3C - ? -