@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VU40: (2017-12-16 )
MSIEKFSVEKVLSVHRWTPTLFSFTMTRPSHFKFTAGQFARIGLKVGDELIVRAYSVVSSPFDETLEFFSIVVPDGAFTSNLQHLKVGDELYLEKIPYGYLTLARYQQPLPHDLWLLATGTGLAPFLSMLQDFETWSNYQKINLVYSVRTAAELAYVDRIQEIAETFGEGHLGFKFIPIITRDPSAPLHERLPVLIENGELEKVAGLELSPASSHVMLCGNPQMVDDTKEALKRCGLTMNRRGEGNIAVENYW

Atome Classification :

(37 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

FAD_B_4(4FK8)
?
[Raw transfer]



FAD_A_2(4B4D)
?
[Raw transfer]



FAD_A_3(3CRZ)
?
[Raw transfer]



FAD_A_3(2QDX)
?
[Raw transfer]



FAD_A_3(2QDX)
?
[Raw transfer]



FAD_D_11(2VNK)
?
[Raw transfer]



FAD_A_2(4B4D)
?
[Raw transfer]



FAD_A_5(2VNK)
?
[Raw transfer]



FAD_B_4(4FK8)
?
[Raw transfer]



FAD_B_7(2VNK)
?
[Raw transfer]



FAD_B_5(4K1X)
?
[Raw transfer]



FAD_B_5(4K1X)
?
[Raw transfer]



FAD_A_3(2BGI)
?
[Raw transfer]



FAD_A_5(2BGJ)
?
[Raw transfer]



FAD_A_3(4K1X)
?
[Raw transfer]



FAD_A_4(5THX)
?
[Raw transfer]



FAD_A_2(2VNH)
?
[Raw transfer]



FAD_C_7(2BGJ)
?
[Raw transfer]



FAD_A_3(4FK8)
?
[Raw transfer]



FAD_A_2(2VNJ)
?
[Raw transfer]



FAD_D_8(2BGJ)
?
[Raw transfer]



FAD_A_3(2BGI)
?
[Raw transfer]



FAD_A_2(2VNI)
?
[Raw transfer]



FAD_C_9(2VNK)
?
[Raw transfer]



FAD_B_2(1A8P)
FENR_AZOVI
[Raw transfer]



FAD_B_6(2BGJ)
?
[Raw transfer]



TRS_B_15(2XNJ)
FENR_ECOLI
[Raw transfer]



TRS_A_5(2XNJ)
FENR_ECOLI
[Raw transfer]



GOL_B_11(2EIX)
?
[Raw transfer]



EDO_A_23(5TR9)
?
[Raw transfer]
24 PsiBlast_CBE 88.1940%-142 - C1 -3FPK - ? -
6 PsiBlast_PDB 86.9540%-141 - C1 -3FPK - ? -
23 PsiBlast_CBE 86.4739% -92 - C1 -5TR9 - ? -
22 PsiBlast_CBE 86.3739% -93 - C1 -5UFA - ? -
2 PsiBlast_PDB 86.2439% -94 - C1 -5UFA - ? -
21 PsiBlast_CBE 85.8639% -91 - C1 -5UFA - ? -
1 PsiBlast_PDB 85.7539% -95 - C1 -5TR9 - ? -
7 PsiBlast_PDB 85.1041% -82 - C1 -1A8P 6.8 FENR_AZOVI
8 PsiBlast_PDB 84.8743% -86 - C1 -5THX 10.9 ?
58 HHSearch 83.6338% -76 - C1 -5UFA - ? -
11 PsiBlast_PDB 82.2540% -84 - C1 -4B4D 10.9 ?
56 HHSearch 82.1338% -62 - C1 -4B4D 8.6 ?
59 HHSearch 81.9938% -77 - C1 -5TR9 2.7 ?
5 PsiBlast_PDB 81.2641%-106 - C1 -1FDR - FENR_ECOLI -
55 HHSearch 80.2539% -99 - C1 -3FPK - ? -
57 HHSearch 80.2041% -56 - C1 -2QDX 7.8 ?
4 PsiBlast_PDB 79.7444% -55 - C1 -3CRZ 11.1 ?
3 PsiBlast_PDB 78.7744% -53 - C1 -2QDX 11.4 ?
25 PsiBlast_CBE 78.2840% -68 - C1 -4FK8 10.3 ?
65 HHSearch 77.7339% -64 - C1 -4FK8 6.8 ?
27 PsiBlast_CBE 75.3537% -23 * C1 *4K1X 10.9 ?
62 HHSearch 74.3335% -18 - C1 -2BGI 6.3 ?
68 HHSearch 74.1636% -27 - C1 -4K1X 10.9 ?
10 PsiBlast_PDB 74.0840% -63 - C1 -4FK8 10.3 ?
18 PsiBlast_PDB 72.2137% -36 - C1 -2VNK 11.1 ?
29 PsiBlast_CBE 72.1637% -37 - C1 -2VNK 10.7 ?
17 PsiBlast_PDB 72.1037% -35 - C1 -2VNJ 10.5 ?
30 PsiBlast_CBE 72.0237% -36 - C1 -2VNK 10.8 ?
19 PsiBlast_PDB 71.7637% -33 - C1 -4K1X 10.8 ?
28 PsiBlast_CBE 71.7237% -35 - C1 -2VNK 11.1 ?
33 PsiBlast_CBE 70.5237% -35 - C1 -2BGJ 10.8 ?
16 PsiBlast_PDB 70.2537% -34 - C1 -2VNI 10.3 ?
15 PsiBlast_PDB 70.1437% -35 - C1 -2VNH 10.1 ?
13 PsiBlast_PDB 69.8237% -29 - C1 -2BGI 11.1 ?
31 PsiBlast_CBE 69.5937% -33 - C1 -2BGJ 10.4 ?
14 PsiBlast_PDB 68.7937% -32 - C1 -2BGJ 11.0 ?
32 PsiBlast_CBE 68.5237% -35 - C1 -2BGJ 11.0 ?