@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VUE2: (2017-12-18 )
MNILIANDDGVFAPGIQALADALKPLGRVVVVAPESERSGFSSALTLDRPLRPIQIAEDVWAVNGTPADCVYLSMNGLFDFEFDLVVSGINRGANLGDDVLYSGTVGAAFEGRLMKQPAIAVSLAGPDVRSYDHKDDYAQAAKWVHDFITKGLPALPPRHIFNINIPDVPQLKGTQITYQGRRAQSKPITSHVDPRGRQVYWIGLAGEAVTDPQRIASQIQSDFFAVANGFVSVTPIQMDATNYAVLEDLQASLG

Atome Classification :

(22 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

ADN_A_7(4XJ7)
SURE_SALTY
[Raw transfer]




ADN_D_18(4XJ7)
SURE_SALTY
[Raw transfer]




ADE_A_7(4XGP)
SURE_SALTY
[Raw transfer]




GOL_A_4(2V4N)
SURE_SALTY
[Raw transfer]




GOL_B_13(4RYU)
SURE_SALTY
[Raw transfer]




ADE_B_10(4XJ7)
SURE_SALTY
[Raw transfer]




MPD_B_15(4RYU)
SURE_SALTY
[Raw transfer]




MPD_C_21(4RYU)
SURE_SALTY
[Raw transfer]




EDO_C_13(4XGP)
SURE_SALTY
[Raw transfer]




EDO_B_9(4G9O)
SURE_SALTY
[Raw transfer]




5 PsiBlast_PDB 84.7844% -80 - C5 -3TY2 - SURE_COXBU -
91 HHSearch 84.6345% -84 - C5 -3TY2 - SURE_COXBU -
3 PsiBlast_PDB 82.0846% -31 - C5 -5KSS - ? -
93 HHSearch 79.7746% -45 - C5 -4XEP - SURE_SALTY -
4 PsiBlast_PDB 79.1746% -26 - C5 -5KST - ? -
12 PsiBlast_PDB 78.4344% -32 - C5 -4XEP - SURE_SALTY -
41 PsiBlast_CBE 77.8144% -32 - C5 -4XGP - SURE_SALTY -
92 HHSearch 77.4646% -44 - C5 -2V4N - SURE_SALTY -
47 PsiBlast_CBE 77.4444% -32 - C5 -4XER - SURE_SALTY -
6 PsiBlast_PDB 77.1645% -26 - C5 -2V4O - SURE_SALTY -
32 PsiBlast_CBE 77.1245% -40 - C5 -4G9O 3.2 SURE_SALTY
34 PsiBlast_CBE 76.9944% -30 - C5 -4XJ7 - SURE_SALTY -
40 PsiBlast_CBE 76.9144% -32 - C5 -4XGP 3.1 SURE_SALTY
35 PsiBlast_CBE 76.9144% -29 - C5 -4XJ7 4.9 SURE_SALTY
86 HHSearch 76.8546% -25 - C5 -5KSR - ? -
39 PsiBlast_CBE 76.8444% -30 - C5 -4XGP - SURE_SALTY -
33 PsiBlast_CBE 76.7944% -25 - C5 -4XJ7 4.6 SURE_SALTY
29 PsiBlast_CBE 76.6345% -27 - C5 -2V4O - SURE_SALTY -
7 PsiBlast_PDB 76.6345% -28 - C5 -2V4N 2.9 SURE_SALTY
13 PsiBlast_PDB 76.4944% -29 - C5 -4XER - SURE_SALTY -
11 PsiBlast_PDB 75.7544% -28 - C5 -4XJ7 3.2 SURE_SALTY
15 PsiBlast_PDB 75.3544% -25 - C5 -4XGP 5.5 SURE_SALTY