@TOME V2.3
(Mar 2018)

Ref. - - Doc.
Global output mode :
Sort entries by :
Sequence Color type :

Show alignment :
Column output:
Score:

Alignment:

3D Common Core:

Structural Clustering:

Modeller Result :

Complexes Modeling
Templates Information:
Sequence & Result Tab:

Values color: [ Good | Correct | Middling | Bad ]Modeled complexes Tab: Displays ligands Score after transfer from template to model
Cell color: RMS between binding site of experimental template and receptor model: [‹ 3Å | ‹ 10Å | › 10Å]
Result: [ Good | Correct | Acceptable | Bad | Empty = ligand not selected during the calculation step or result rejected ]

Query sequence : B0VUE7: (2017-12-18 )
MRMLHTMLRVGNLEQSLKFYTEVLGMKLLRKRDYEEGRFTLAFVGYGDEENNTMLELTHNWDTSSYDLGNGYGHIAIGVEDAYKACEEIKARGGKVVREAGPMKGGVTVIAFVEDPDGYKVELIQQDANARNN

Atome Classification :

(22 SA) Binding Score for complex ligand / Scwrl (Unconserved SChains Recalculated) model (Only selected ligand are displayed)
(Atome) (Ident) (Tito) (Num) (pKd) (Uniprot)

MPD_D_18(2C21)
?
[Raw transfer]




MPD_E_22(2C21)
?
[Raw transfer]




MPD_B_11(2C21)
?
[Raw transfer]




ZBF_A_4(4OPN)
LGUL_MOUSE
[Raw transfer]




ZBF_B_6(4OPN)
LGUL_MOUSE
[Raw transfer]




HPU_D_15(3W0T)
LGUL_HUMAN
[Raw transfer]




HPW_B_6(3W0U)
LGUL_HUMAN
[Raw transfer]




GOL_B_8(4MTS)
?
[Raw transfer]




GOL_B_8(4MTS)
?
[Raw transfer]




HPU_B_10(3W0T)
LGUL_HUMAN
[Raw transfer]




GOL_A_6(4MTT)
?
[Raw transfer]




GOL_A_4(4MTS)
?
[Raw transfer]




HPW_A_5(3W0U)
LGUL_HUMAN
[Raw transfer]




CBW_A_4(4PV5)
LGUL_MOUSE
[Raw transfer]




ZST_A_5(4KYH)
LGUL_MOUSE
[Raw transfer]




MPD_D_16(2C21)
?
[Raw transfer]




3 PsiBlast_PDB 93.1664%-120 - C2 -4MTT - ? -
22 PsiBlast_CBE 92.2764%-109 - C2 -4MTS 2.6 ?
57 HHSearch 91.7863%-108 - C2 -4MTS 2.6 ?
24 PsiBlast_CBE 91.4764%-118 - C2 -4MTQ - ? -
58 HHSearch 91.3263%-109 - C2 -4MTS 3.1 ?
2 PsiBlast_PDB 90.9264%-114 - C2 -4MTS - ? -
21 PsiBlast_CBE 90.9064%-108 - C2 -4MTT 3.1 ?
23 PsiBlast_CBE 89.6364%-135 - C2 -4MTR - ? -
1 PsiBlast_PDB 87.2664%-125 - C2 -4MTQ - ? -
4 PsiBlast_PDB 86.8856%-106 - C2 -5D7Z - ? -
74 HHSearch 86.8655%-103 - C2 -5D7Z - ? -
28 PsiBlast_CBE 83.8549%-129 - C2 -2C21 Error ?
25 PsiBlast_CBE 83.8349%-133 - C2 -2C21 Error ?
27 PsiBlast_CBE 83.7749%-131 - C2 -2C21 2.4 ?
62 HHSearch 83.0250%-126 - C2 -2C21 - ? -
26 PsiBlast_CBE 82.8249%-135 - C2 -2C21 - ? -
29 PsiBlast_CBE 82.6349%-130 - C2 -2C21 - ? -
5 PsiBlast_PDB 82.4649%-135 - C2 -2C21 Error ?
46 PsiBlast_CBE 73.4038% -14 - C2 -3W0T - LGUL_HUMAN -
47 PsiBlast_CBE 73.1038% -9 - C2 -3VW9 - LGUL_HUMAN -
35 PsiBlast_CBE 72.1538% -15 - C2 -4PV5 2.7 LGUL_MOUSE
7 PsiBlast_PDB 69.4138% -10 - C2 -4KYH 3.9 LGUL_MOUSE