Binding Site Information :
Doc...
Information extracted from the bests complexes created by comparative docking.



Prediction Binding Site :


Binding Site Prediction
[Download fasta file] - [Download text file]

Binding Site Number :C1_S1
Best Complexes choosen after comparative docking [pKd > 3] : 2 (5 maxi)

Complexes [Theoretical pKd]FileVolume (A3)
(FPocket)
Hydrophobicity
Score(FPocket)
Contacts Ligand/Receptor [<4A] in Site C1_S1
Complex: 1CP_A_2(1R3Q) / Model_8(1R3Q/A) = [11.0] Download560.8724.55MTTLKNDRFLRALLREPVDTTPIWMMRQAGRYLPEYRETRSKAGDFLSLCKNTEFACEVTLQPLRRYDLDAAILFSDILTIPDALGLGLYFETGEGPKFHKTVRTEQDVANLPKLNAKADLDYVMNAVSTIRSALGGQVPLIGFSGSPWTLATYMVEGGSSKEFRFTKQMMYAQPEVLHALLDHLADSVIDYLNAQIDAGAQAIQIFDSWGGALAHREYVEFSLNYMNKIIAGLQREKDGRRIPVIVFTKGGGQWLEPMITTGADALGLDWTTPLNTARNVVSGRVALQGNLDPAVLYGSAASIEKAVKAMLDDAYANGEKTGYVANLGHGITQWVDPAQPKIFVDTVHEYSAKYLG
Complex: CP3_A_2(1R3W) / Model_16(1R3W/A) = [10.4] Download529.6026.00MTTLKNDRFLRALLREPVDTTPIWMMRQAGRYLPEYRETRSKAGDFLSLCKNTEFACEVTLQPLRRYDLDAAILFSDILTIPDALGLGLYFETGEGPKFHKTVRTEQDVANLPKLNAKADLDYVMNAVSTIRSALGGQVPLIGFSGSPWTLATYMVEGGSSKEFRFTKQMMYAQPEVLHALLDHLADSVIDYLNAQIDAGAQAIQIFDSWGGALAHREYVEFSLNYMNKIIAGLQREKDGRRIPVIVFTKGGGQWLEPMITTGADALGLDWTTPLNTARNVVSGRVALQGNLDPAVLYGSAASIEKAVKAMLDDAYANGEKTGYVANLGHGITQWVDPAQPKIFVDTVHEYSAKYLG
Consensus
[pKd Mean = 10.70]
-545
(s=15)
25
(s=0)
MTTLKNDRFLRALLREPVDTTPIWMMRQAGRYLPEYRETRSKAGDFLSLCKNTEFACEVTLQPLRRYDLDAAILFSDILTIPDALGLGLYFETGEGPKFHKTVRTEQDVANLPKLNAKADLDYVMNAVSTIRSALGGQVPLIGFSGSPWTLATYMVEGGSSKEFRFTKQMMYAQPEVLHALLDHLADSVIDYLNAQIDAGAQAIQIFDSWGGALAHREYVEFSLNYMNKIIAGLQREKDGRRIPVIVFTKGGGQWLEPMITTGADALGLDWTTPLNTARNVVSGRVALQGNLDPAVLYGSAASIEKAVKAMLDDAYANGEKTGYVANLGHGITQWVDPAQPKIFVDTVHEYSAKYLG



Statistical distribution of contacts between receptors and ligands in all complexes :
(only contacts < 8A are taken into consideration)


Res_NameRes_NumRes_AtNb_ContactsNb_ComplexesNb[At_Ligand]
TRP24CD2222[O],
TRP24CE3722[O], 5[C],
TRP24CZ2121[C],
TRP24CZ314210[C], 4[O],
MET26CG22217[C], 5[O],
MET26CE724[C], 3[O],
MET26SD14210[C], 4[O],
ARG27CG7429[O], 8[N], 57[C],
ARG27CZ83264[C], 8[N], 11[O],
ARG27NE8028[N], 11[O], 61[C],
ARG27CD83266[C], 9[O], 8[N],
GLN28CD824[O], 4[C],
GLN28NE2624[C], 2[O],
GLN28CG1026[C], 4[O],
GLN28OE1422[C], 2[O],
ARG31CD24219[C], 1[N], 4[O],
ARG31CG2224[O], 1[N], 17[C],
ARG31NE23218[C], 4[O], 1[N],
ARG31CZ2322[N], 4[O], 17[C],
TYR32CD2523[C], 2[O],
TYR32CE2926[O], 3[C],
TYR32CZ222[O],
TYR32CG221[O], 1[C],
TYR36CD22326[O], 17[C],
TYR36CE229221[C], 2[N], 6[O],
TYR36CG20214[C], 6[O],
TYR36CE13722[N], 8[O], 27[C],
TYR36CZ3922[N], 8[O], 29[C],
TYR36CD125218[C], 7[O],
ARG37CG423[O], 1[C],
ARG40CG12210[C], 2[O],
ARG40NE23219[C], 2[N], 2[O],
ARG40CD21217[C], 2[O], 2[N],
ARG40CZ20216[C], 2[N], 2[O],
PHE46CD13822[O], 6[N], 30[C],
PHE46CE156242[C], 8[N], 6[O],
PHE46CZ61248[C], 5[O], 8[N],
PHE46CG32226[C], 4[N], 2[O],
PHE46CE24828[N], 2[O], 38[C],
PHE46CD238230[C], 6[N], 2[O],
LEU49CD212211[C], 1[O],
CYS50SG22218[C], 4[N],
VAL59CG2322[O], 1[C],
VAL59CG12224[O], 18[C],
THR60CG2622[O], 4[C],
THR60OG11026[C], 4[O],
PRO63CG622[C], 4[O],
PRO63CD422[O], 2[C],
ILE73CG22024[O], 16[C],
ILE73CG123218[C], 1[N], 4[O],
ILE73CD124218[C], 2[N], 4[O],
LEU74CG222[C],
PHE75CG36228[C], 4[O], 4[N],
PHE75CE148236[C], 8[O], 4[N],
PHE75CE24025[O], 4[N], 31[C],
PHE75CD23324[N], 4[O], 25[C],
PHE75CZ4728[O], 4[N], 35[C],
PHE75CD142233[C], 4[N], 5[O],
SER76OG1722[N], 15[C],
ASP77OD27628[N], 3[O], 65[C],
ASP77OD161253[C], 8[N],
ASP77CG6728[N], 59[C],
ILE78CG24424[O], 6[N], 34[C],
ILE78CD148236[C], 6[N], 6[O],
ILE78CG15328[N], 3[O], 42[C],
LEU79CG3325[N], 28[C],
LEU79CD22724[N], 23[C],
LEU79CD140231[C], 3[O], 6[N],
LEU89CD2722[N], 5[C],
LEU89CD1321[N], 2[C],
PHE91CD223217[C], 4[N], 2[O],
PHE91CG2722[O], 4[N], 21[C],
PHE91CD13624[N], 2[O], 30[C],
PHE91CE14024[N], 3[O], 33[C],
PHE91CE227221[C], 4[N], 2[O],
PHE91CZ39231[C], 4[N], 4[O],
PRO97CG3824[O], 6[N], 28[C],
PRO97CD4124[O], 6[N], 31[C],
ILE142CG2222[C],
PHE144CG2824[N], 24[C],
PHE144CE14222[O], 6[N], 34[C],
PHE144CE23424[O], 4[N], 26[C],
PHE144CZ43233[C], 4[O], 6[N],
PHE144CD135231[C], 4[N],
PHE144CD22822[N], 4[O], 22[C],
THR150CG224218[C], 1[N], 5[O],
THR150OG11023[O], 7[C],
LEU151CD210210[C],
THR153OG1321[O], 2[C],
TYR154CD13124[O], 3[N], 24[C],
TYR154CG2224[O], 18[C],
TYR154CE23725[O], 4[N], 28[C],
TYR154CE137228[C], 4[N], 5[O],
TYR154CZ4124[N], 5[O], 32[C],
TYR154CD22724[O], 3[N], 20[C],
SER160OG1127[C], 4[O],
PHE164CE2323[O],
PHE164CZ323[O],
GLN205NE21123[O], 8[C],
GLN205CD422[C], 2[O],
GLN205CG322[C], 1[O],
PHE207CE24024[O], 4[N], 32[C],
PHE207CG3424[O], 4[N], 26[C],
PHE207CD234226[C], 4[N], 4[O],
PHE207CZ4024[N], 6[O], 30[C],
PHE207CE137229[C], 4[O], 4[N],
PHE207CD139231[C], 4[N], 4[O],
ASP208OD1121[O],
SER209OG32224[C], 2[N], 6[O],
TRP210CD12526[O], 19[C],
TRP210CZ219214[C], 5[O],
TRP210CD21125[O], 6[C],
TRP210CE22226[O], 16[C],
TRP210CG1225[O], 7[C],
TRP210NE13227[O], 25[C],
TRP210CE3925[O], 4[C],
TRP210CZ3824[C], 4[O],
PHE248CE1624[O], 2[C],
PHE248CZ1026[C], 4[O],
PHE248CD21127[C], 4[O],
PHE248CE21124[O], 7[C],
PHE248CD1522[C], 3[O],
PHE248CG1024[O], 6[C],
LYS250CE723[C], 4[O],
LYS250NZ421[C], 3[O],
LYS250CD925[C], 4[O],
LYS250CG824[O], 4[C],
HIS330CG1024[O], 6[C],
HIS330NE22321[N], 5[O], 17[C],
HIS330CE120215[C], 5[O],
HIS330CD21724[O], 13[C],
HIS330ND11225[O], 7[C],
ILE332CG2422[C], 2[O],
ILE332CD1222[O],
GLN334NE214210[C], 4[O],
GLN334OE11026[C], 4[O],
GLN334CD1127[C], 4[O],
GLN334CG1124[O], 7[C],
Total = 138



Download csv file of statistical distribution of contacts